Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.34□□□□□ -1.55
COL11A1P12107 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.34□□□□□ -1.55
COL11A1P12107 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.34□□□□□ -1.55
COL11A1P12107 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COL11A1P12107 SCARNA10-201ENST00000459255 330 ntBASIC5.34□□□□□ -1.55
COL11A1P12107 RPL7AP10-201ENST00000481016 791 ntBASIC5.34□□□□□ -1.55
COL11A1P12107 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.34□□□□□ -1.55
COL11A1P12107 SNORA70.11-201ENST00000515987 138 ntBASIC5.34□□□□□ -1.55
COL11A1P12107 SNORA70.13-201ENST00000516116 138 ntBASIC5.34□□□□□ -1.55
COL11A1P12107 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COL11A1P12107 MIR1254-2-201ENST00000579553 63 ntBASIC5.34□□□□□ -1.55
COL11A1P12107 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.34□□□□□ -1.55
COL11A1P12107 OR7A19P-201ENST00000608051 733 ntBASIC5.34□□□□□ -1.55
COL11A1P12107 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COL11A1P12107 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC5.34□□□□□ -1.55
COL11A1P12107 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
COL11A1P12107 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.34□□□□□ -1.55
COL11A1P12107 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COL11A1P12107 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.34□□□□□ -1.55
COL11A1P12107 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
COL11A1P12107 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL11A1P12107 AC018628.1-201ENST00000624147 3819 ntBASIC5.34□□□□□ -1.55
COL11A1P12107 STX3-208ENST00000641815 3236 ntBASIC5.34□□□□□ -1.55
COL11A1P12107 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COL11A1P12107 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
COL11A1P12107 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
COL11A1P12107 ZNF137P-201ENST00000456718 1920 ntBASIC5.34□□□□□ -1.55
COL11A1P12107 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COL11A1P12107 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.34□□□□□ -1.55
COL11A1P12107 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.34□□□□□ -1.55
COL11A1P12107 AL583835.1-201ENST00000399570 407 ntBASIC5.34□□□□□ -1.55
COL11A1P12107 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.34□□□□□ -1.55
COL11A1P12107 PCNPP4-201ENST00000414817 517 ntBASIC5.34□□□□□ -1.55
COL11A1P12107 RPL23AP24-201ENST00000458203 385 ntBASIC5.34□□□□□ -1.55
COL11A1P12107 AC108751.3-201ENST00000461814 1020 ntBASIC5.34□□□□□ -1.55
COL11A1P12107 AC023424.1-201ENST00000496058 459 ntBASIC5.34□□□□□ -1.55
COL11A1P12107 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.34□□□□□ -1.55
COL11A1P12107 AC015795.1-201ENST00000513669 327 ntBASIC5.34□□□□□ -1.55
COL11A1P12107 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.34□□□□□ -1.55
COL11A1P12107 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.34□□□□□ -1.55
COL11A1P12107 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.34□□□□□ -1.55
COL11A1P12107 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.34□□□□□ -1.55
COL11A1P12107 AC006349.1-201ENST00000555526 235 ntBASIC5.34□□□□□ -1.55
COL11A1P12107 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.34□□□□□ -1.55
COL11A1P12107 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.34□□□□□ -1.55
COL11A1P12107 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.34□□□□□ -1.55
COL11A1P12107 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.34□□□□□ -1.55
COL11A1P12107 AC005962.2-201ENST00000611427 652 ntBASIC5.34□□□□□ -1.55
COL11A1P12107 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
COL11A1P12107 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
COL11A1P12107 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL11A1P12107 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL11A1P12107 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL11A1P12107 AC009951.1-201ENST00000623674 2614 ntBASIC5.33□□□□□ -1.56
COL11A1P12107 SNORA5.1-201ENST00000384275 131 ntBASIC5.33□□□□□ -1.56
COL11A1P12107 RN7SKP263-201ENST00000411194 309 ntBASIC5.33□□□□□ -1.56
COL11A1P12107 AL732292.1-201ENST00000426692 226 ntBASIC5.33□□□□□ -1.56
COL11A1P12107 AP001324.1-201ENST00000428553 399 ntBASIC5.33□□□□□ -1.56
COL11A1P12107 AL049874.2-201ENST00000492636 288 ntBASIC5.33□□□□□ -1.56
COL11A1P12107 MTND4LP2-201ENST00000502312 285 ntBASIC5.33□□□□□ -1.56
COL11A1P12107 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.33□□□□□ -1.56
COL11A1P12107 AC015912.2-201ENST00000571053 181 ntBASIC5.33□□□□□ -1.56
COL11A1P12107 KPNA2P3-201ENST00000584190 848 ntBASIC5.33□□□□□ -1.56
COL11A1P12107 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC5.33□□□□□ -1.56
COL11A1P12107 AL356218.2-201ENST00000605264 187 ntBASIC5.33□□□□□ -1.56
COL11A1P12107 AC010857.1-201ENST00000606398 594 ntBASIC5.33□□□□□ -1.56
COL11A1P12107 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL11A1P12107 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL11A1P12107 AP000473.2-201ENST00000602659 1537 ntBASIC5.33□□□□□ -1.56
COL11A1P12107 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL11A1P12107 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.33□□□□□ -1.56
COL11A1P12107 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL11A1P12107 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL11A1P12107 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL11A1P12107 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
COL11A1P12107 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL11A1P12107 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL11A1P12107 MIR133A2-201ENST00000347538 102 ntBASIC5.32□□□□□ -1.56
COL11A1P12107 RPL17P36-201ENST00000420302 549 ntBASIC5.32□□□□□ -1.56
COL11A1P12107 RPL7AP25-201ENST00000423357 805 ntBASIC5.32□□□□□ -1.56
COL11A1P12107 AC012519.1-201ENST00000424588 610 ntBASIC5.32□□□□□ -1.56
COL11A1P12107 AC092162.1-201ENST00000432828 434 ntBASIC5.32□□□□□ -1.56
COL11A1P12107 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.32□□□□□ -1.56
COL11A1P12107 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL11A1P12107 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.32□□□□□ -1.56
COL11A1P12107 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.32□□□□□ -1.56
COL11A1P12107 AC067959.1-201ENST00000604334 379 ntBASIC5.32□□□□□ -1.56
COL11A1P12107 AL591034.3-201ENST00000605511 685 ntBASIC5.32□□□□□ -1.56
COL11A1P12107 AC245389.2-201ENST00000616023 576 ntBASIC5.32□□□□□ -1.56
COL11A1P12107 AC242843.1-201ENST00000618702 573 ntBASIC5.32□□□□□ -1.56
COL11A1P12107 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL11A1P12107 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL11A1P12107 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL11A1P12107 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL11A1P12107 U3.35-201ENST00000408405 208 ntBASIC5.32□□□□□ -1.56
COL11A1P12107 AC239367.2-201ENST00000447309 705 ntBASIC5.32□□□□□ -1.56
COL11A1P12107 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
COL11A1P12107 AC103987.1-201ENST00000473394 348 ntBASIC5.32□□□□□ -1.56
COL11A1P12107 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.32□□□□□ -1.56
COL11A1P12107 AC105031.1-201ENST00000518550 476 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 147.2 ms