Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 HIGD1AP15-201ENST00000416198 280 ntBASIC6.21□□□□□ -1.42
HLA-DOAP06340 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.21□□□□□ -1.42
HLA-DOAP06340 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC6.21□□□□□ -1.42
HLA-DOAP06340 EI24P4-201ENST00000423683 1078 ntBASIC6.21□□□□□ -1.42
HLA-DOAP06340 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.21□□□□□ -1.42
HLA-DOAP06340 RPL34P27-201ENST00000428810 349 ntBASIC6.21□□□□□ -1.42
HLA-DOAP06340 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC6.21□□□□□ -1.42
HLA-DOAP06340 MTCYBP21-201ENST00000443300 1113 ntBASIC6.21□□□□□ -1.42
HLA-DOAP06340 RPL31P20-201ENST00000449593 360 ntBASIC6.21□□□□□ -1.42
HLA-DOAP06340 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.21□□□□□ -1.42
HLA-DOAP06340 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC6.21□□□□□ -1.42
HLA-DOAP06340 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC6.21□□□□□ -1.42
HLA-DOAP06340 SSR3-206ENST00000476217 807 ntTSL 3 BASIC6.21□□□□□ -1.42
HLA-DOAP06340 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.21□□□□□ -1.42
HLA-DOAP06340 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DOAP06340 RN7SKP260-201ENST00000516907 149 ntBASIC6.21□□□□□ -1.42
HLA-DOAP06340 AP001922.4-201ENST00000526967 290 ntBASIC6.21□□□□□ -1.42
HLA-DOAP06340 OR4A43P-201ENST00000532938 908 ntBASIC6.21□□□□□ -1.42
HLA-DOAP06340 DPPA3P2-201ENST00000553589 478 ntBASIC6.21□□□□□ -1.42
HLA-DOAP06340 AC023825.1-201ENST00000566704 1030 ntBASIC6.21□□□□□ -1.42
HLA-DOAP06340 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC6.21□□□□□ -1.42
HLA-DOAP06340 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
HLA-DOAP06340 GAS5-AS1-201ENST00000602767 694 ntBASIC6.21□□□□□ -1.42
HLA-DOAP06340 AC022022.2-201ENST00000602989 360 ntBASIC6.21□□□□□ -1.42
HLA-DOAP06340 AC004775.1-201ENST00000607389 753 ntBASIC6.21□□□□□ -1.42
HLA-DOAP06340 EIF3FP1-201ENST00000613970 806 ntBASIC6.21□□□□□ -1.42
HLA-DOAP06340 AL353662.3-201ENST00000625131 237 ntBASIC6.21□□□□□ -1.42
HLA-DOAP06340 AC068620.4-201ENST00000636730 1182 ntBASIC6.21□□□□□ -1.42
HLA-DOAP06340 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.21□□□□□ -1.42
HLA-DOAP06340 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.21□□□□□ -1.42
HLA-DOAP06340 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DOAP06340 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.21□□□□□ -1.42
HLA-DOAP06340 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DOAP06340 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DOAP06340 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC6.21□□□□□ -1.42
HLA-DOAP06340 AL929601.4-201ENST00000613011 1341 ntBASIC6.21□□□□□ -1.42
HLA-DOAP06340 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
HLA-DOAP06340 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DOAP06340 EPS15P1-202ENST00000459691 2071 ntBASIC6.21□□□□□ -1.42
HLA-DOAP06340 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
HLA-DOAP06340 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.21□□□□□ -1.42
HLA-DOAP06340 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
HLA-DOAP06340 AC138907.8-201ENST00000623981 2256 ntBASIC6.2□□□□□ -1.42
HLA-DOAP06340 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
HLA-DOAP06340 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
HLA-DOAP06340 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DOAP06340 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
HLA-DOAP06340 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
HLA-DOAP06340 RNA5SP90-201ENST00000364801 99 ntBASIC6.2□□□□□ -1.42
HLA-DOAP06340 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DOAP06340 MIR1182-201ENST00000408363 97 ntBASIC6.2□□□□□ -1.42
HLA-DOAP06340 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.2□□□□□ -1.42
HLA-DOAP06340 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DOAP06340 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
HLA-DOAP06340 DDX39BP1-205ENST00000422507 192 ntBASIC6.2□□□□□ -1.42
HLA-DOAP06340 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.2□□□□□ -1.42
HLA-DOAP06340 MTND5P25-201ENST00000430499 799 ntBASIC6.2□□□□□ -1.42
HLA-DOAP06340 RPL7P34-201ENST00000433316 712 ntBASIC6.2□□□□□ -1.42
HLA-DOAP06340 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.2□□□□□ -1.42
HLA-DOAP06340 AL161722.2-201ENST00000434731 981 ntBASIC6.2□□□□□ -1.42
HLA-DOAP06340 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.2□□□□□ -1.42
HLA-DOAP06340 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC6.2□□□□□ -1.42
HLA-DOAP06340 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DOAP06340 EIF2S2P2-201ENST00000447161 982 ntBASIC6.2□□□□□ -1.42
HLA-DOAP06340 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.2□□□□□ -1.42
HLA-DOAP06340 ABCC13-202ENST00000463099 3842 ntBASIC6.2□□□□□ -1.42
HLA-DOAP06340 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC6.2□□□□□ -1.42
HLA-DOAP06340 AC110775.1-201ENST00000513721 462 ntBASIC6.2□□□□□ -1.42
HLA-DOAP06340 HMGN1P9-201ENST00000515212 298 ntBASIC6.2□□□□□ -1.42
HLA-DOAP06340 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC6.2□□□□□ -1.42
HLA-DOAP06340 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC6.2□□□□□ -1.42
HLA-DOAP06340 AC022360.1-201ENST00000521058 340 ntBASIC6.2□□□□□ -1.42
HLA-DOAP06340 AC118942.1-201ENST00000529674 1035 ntBASIC6.2□□□□□ -1.42
HLA-DOAP06340 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.2□□□□□ -1.42
HLA-DOAP06340 MIR4700-201ENST00000578311 74 ntBASIC6.2□□□□□ -1.42
HLA-DOAP06340 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6.2□□□□□ -1.42
HLA-DOAP06340 AC011840.5-201ENST00000582125 771 ntBASIC6.2□□□□□ -1.42
HLA-DOAP06340 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC6.2□□□□□ -1.42
HLA-DOAP06340 AC245036.5-201ENST00000596330 847 ntBASIC6.2□□□□□ -1.42
HLA-DOAP06340 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC6.2□□□□□ -1.42
HLA-DOAP06340 AC093799.2-201ENST00000610062 578 ntBASIC6.2□□□□□ -1.42
HLA-DOAP06340 AC015660.5-201ENST00000623238 564 ntBASIC6.2□□□□□ -1.42
HLA-DOAP06340 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC6.2□□□□□ -1.42
HLA-DOAP06340 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC6.2□□□□□ -1.42
HLA-DOAP06340 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.2□□□□□ -1.42
HLA-DOAP06340 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DOAP06340 AC023421.1-201ENST00000590535 1785 ntBASIC6.2□□□□□ -1.42
HLA-DOAP06340 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DOAP06340 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.2□□□□□ -1.42
HLA-DOAP06340 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DOAP06340 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DOAP06340 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.2□□□□□ -1.42
HLA-DOAP06340 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.19□□□□□ -1.42
HLA-DOAP06340 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-DOAP06340 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
HLA-DOAP06340 RN7SKP185-201ENST00000362813 326 ntBASIC6.19□□□□□ -1.42
HLA-DOAP06340 RNU6-697P-201ENST00000363348 107 ntBASIC6.19□□□□□ -1.42
HLA-DOAP06340 RNU5E-10P-201ENST00000363506 118 ntBASIC6.19□□□□□ -1.42
HLA-DOAP06340 RN7SKP153-201ENST00000365026 316 ntBASIC6.19□□□□□ -1.42
HLA-DOAP06340 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms