Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.48□□□□□ -1.53
MSI1O43347 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC5.48□□□□□ -1.53
MSI1O43347 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.48□□□□□ -1.53
MSI1O43347 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.48□□□□□ -1.53
MSI1O43347 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC5.48□□□□□ -1.53
MSI1O43347 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.48□□□□□ -1.53
MSI1O43347 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
MSI1O43347 MTND6P5-201ENST00000448266 512 ntBASIC5.48□□□□□ -1.53
MSI1O43347 Z92846.1-201ENST00000456203 268 ntBASIC5.48□□□□□ -1.53
MSI1O43347 AC108161.1-201ENST00000461060 402 ntBASIC5.48□□□□□ -1.53
MSI1O43347 AC009127.1-201ENST00000467090 155 ntBASIC5.48□□□□□ -1.53
MSI1O43347 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
MSI1O43347 BX284632.1-201ENST00000478218 541 ntBASIC5.48□□□□□ -1.53
MSI1O43347 RPL7P40-201ENST00000481703 745 ntBASIC5.48□□□□□ -1.53
MSI1O43347 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.48□□□□□ -1.53
MSI1O43347 PRELID3BP6-201ENST00000503839 571 ntBASIC5.48□□□□□ -1.53
MSI1O43347 FTH1P11-201ENST00000517577 551 ntBASIC5.48□□□□□ -1.53
MSI1O43347 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.48□□□□□ -1.53
MSI1O43347 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.48□□□□□ -1.53
MSI1O43347 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.48□□□□□ -1.53
MSI1O43347 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
MSI1O43347 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.48□□□□□ -1.53
MSI1O43347 AC008759.3-201ENST00000613300 508 ntBASIC5.48□□□□□ -1.53
MSI1O43347 AC018445.2-201ENST00000622987 260 ntBASIC5.48□□□□□ -1.53
MSI1O43347 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.48□□□□□ -1.53
MSI1O43347 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.48□□□□□ -1.53
MSI1O43347 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
MSI1O43347 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
MSI1O43347 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
MSI1O43347 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
MSI1O43347 AC079298.1-201ENST00000625026 1619 ntBASIC5.48□□□□□ -1.53
MSI1O43347 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.48□□□□□ -1.53
MSI1O43347 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
MSI1O43347 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
MSI1O43347 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
MSI1O43347 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
MSI1O43347 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.47□□□□□ -1.53
MSI1O43347 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
MSI1O43347 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.47□□□□□ -1.53
MSI1O43347 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.47□□□□□ -1.53
MSI1O43347 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
MSI1O43347 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.47□□□□□ -1.53
MSI1O43347 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
MSI1O43347 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
MSI1O43347 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
MSI1O43347 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
MSI1O43347 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
MSI1O43347 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
MSI1O43347 RNU1-106P-201ENST00000384382 164 ntBASIC5.47□□□□□ -1.53
MSI1O43347 GSTA12P-201ENST00000402398 508 ntBASIC5.47□□□□□ -1.53
MSI1O43347 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.47□□□□□ -1.53
MSI1O43347 RNU4-34P-201ENST00000410431 124 ntBASIC5.47□□□□□ -1.53
MSI1O43347 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.47□□□□□ -1.53
MSI1O43347 BX664727.1-201ENST00000416024 466 ntBASIC5.47□□□□□ -1.53
MSI1O43347 HYALP1-201ENST00000417674 1279 ntBASIC5.47□□□□□ -1.53
MSI1O43347 AC106883.1-201ENST00000418805 562 ntBASIC5.47□□□□□ -1.53
MSI1O43347 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.47□□□□□ -1.53
MSI1O43347 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.47□□□□□ -1.53
MSI1O43347 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.47□□□□□ -1.53
MSI1O43347 AC005033.1-201ENST00000428904 813 ntBASIC5.47□□□□□ -1.53
MSI1O43347 BX119904.1-201ENST00000432026 348 ntBASIC5.47□□□□□ -1.53
MSI1O43347 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.47□□□□□ -1.53
MSI1O43347 NOP56P2-201ENST00000447491 769 ntBASIC5.47□□□□□ -1.53
MSI1O43347 AC026348.1-201ENST00000462549 1053 ntBASIC5.47□□□□□ -1.53
MSI1O43347 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.47□□□□□ -1.53
MSI1O43347 AC104982.1-201ENST00000478775 574 ntBASIC5.47□□□□□ -1.53
MSI1O43347 RPL15P21-201ENST00000495592 567 ntBASIC5.47□□□□□ -1.53
MSI1O43347 PPM1AP1-201ENST00000502740 1135 ntBASIC5.47□□□□□ -1.53
MSI1O43347 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.47□□□□□ -1.53
MSI1O43347 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.47□□□□□ -1.53
MSI1O43347 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.47□□□□□ -1.53
MSI1O43347 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC5.47□□□□□ -1.53
MSI1O43347 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.47□□□□□ -1.53
MSI1O43347 RFPL4AP3-201ENST00000515267 345 ntBASIC5.47□□□□□ -1.53
MSI1O43347 RNA5SP230-201ENST00000517039 122 ntBASIC5.47□□□□□ -1.53
MSI1O43347 MTND2P32-201ENST00000521584 1038 ntBASIC5.47□□□□□ -1.53
MSI1O43347 OR10G5P-201ENST00000532733 358 ntBASIC5.47□□□□□ -1.53
MSI1O43347 HAUS8P1-201ENST00000549005 542 ntBASIC5.47□□□□□ -1.53
MSI1O43347 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
MSI1O43347 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
MSI1O43347 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC5.47□□□□□ -1.53
MSI1O43347 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
MSI1O43347 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.47□□□□□ -1.53
MSI1O43347 AC016839.1-201ENST00000578162 867 ntBASIC5.47□□□□□ -1.53
MSI1O43347 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.47□□□□□ -1.53
MSI1O43347 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.47□□□□□ -1.53
MSI1O43347 CLIC4P2-201ENST00000601934 717 ntBASIC5.47□□□□□ -1.53
MSI1O43347 AC079880.2-201ENST00000603790 1213 ntBASIC5.47□□□□□ -1.53
MSI1O43347 AC018690.1-201ENST00000608144 626 ntBASIC5.47□□□□□ -1.53
MSI1O43347 AP001033.2-201ENST00000609701 1003 ntBASIC5.47□□□□□ -1.53
MSI1O43347 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
MSI1O43347 AC084824.4-201ENST00000620106 731 ntBASIC5.47□□□□□ -1.53
MSI1O43347 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC5.47□□□□□ -1.53
MSI1O43347 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.47□□□□□ -1.53
MSI1O43347 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.47□□□□□ -1.53
MSI1O43347 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
MSI1O43347 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
MSI1O43347 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
MSI1O43347 GVINP1-202ENST00000531871 7271 ntBASIC5.47□□□□□ -1.53
MSI1O43347 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms