Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM38O00635 AC092647.3-201ENST00000443044 633 ntBASIC5.67□□□□□ -1.5
TRIM38O00635 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.67□□□□□ -1.5
TRIM38O00635 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.67□□□□□ -1.5
TRIM38O00635 Z99714.1-201ENST00000450463 807 ntBASIC5.67□□□□□ -1.5
TRIM38O00635 SBDSP1-204ENST00000453858 737 ntBASIC5.67□□□□□ -1.5
TRIM38O00635 SEPT7P3-201ENST00000455017 621 ntBASIC5.67□□□□□ -1.5
TRIM38O00635 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.67□□□□□ -1.5
TRIM38O00635 RPL21P18-201ENST00000469899 480 ntBASIC5.67□□□□□ -1.5
TRIM38O00635 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM38O00635 AC009120.1-201ENST00000493458 473 ntBASIC5.67□□□□□ -1.5
TRIM38O00635 GTF2IP9-201ENST00000502460 301 ntBASIC5.67□□□□□ -1.5
TRIM38O00635 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.67□□□□□ -1.5
TRIM38O00635 BX510359.5-201ENST00000515651 304 ntBASIC5.67□□□□□ -1.5
TRIM38O00635 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM38O00635 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM38O00635 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM38O00635 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.67□□□□□ -1.5
TRIM38O00635 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM38O00635 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.67□□□□□ -1.5
TRIM38O00635 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM38O00635 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM38O00635 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.67□□□□□ -1.5
TRIM38O00635 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM38O00635 AC087752.4-201ENST00000605911 462 ntBASIC5.67□□□□□ -1.5
TRIM38O00635 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM38O00635 AL022394.1-201ENST00000606979 292 ntBASIC5.67□□□□□ -1.5
TRIM38O00635 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM38O00635 AC007786.3-201ENST00000615154 596 ntBASIC5.67□□□□□ -1.5
TRIM38O00635 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM38O00635 AC018445.2-201ENST00000622987 260 ntBASIC5.67□□□□□ -1.5
TRIM38O00635 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM38O00635 AC011815.3-201ENST00000624194 473 ntBASIC5.67□□□□□ -1.5
TRIM38O00635 AC126544.2-201ENST00000625174 749 ntBASIC5.67□□□□□ -1.5
TRIM38O00635 AC013437.2-201ENST00000639587 677 ntBASIC5.67□□□□□ -1.5
TRIM38O00635 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM38O00635 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM38O00635 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
TRIM38O00635 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM38O00635 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM38O00635 AL645568.2-201ENST00000432815 1337 ntBASIC5.67□□□□□ -1.5
TRIM38O00635 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.67□□□□□ -1.5
TRIM38O00635 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
TRIM38O00635 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM38O00635 AL132640.2-201ENST00000559968 1698 ntBASIC5.66□□□□□ -1.5
TRIM38O00635 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
TRIM38O00635 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.66□□□□□ -1.5
TRIM38O00635 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.66□□□□□ -1.5
TRIM38O00635 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM38O00635 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
TRIM38O00635 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM38O00635 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.66□□□□□ -1.5
TRIM38O00635 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.66□□□□□ -1.5
TRIM38O00635 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.66□□□□□ -1.5
TRIM38O00635 RN7SKP74-201ENST00000362849 309 ntBASIC5.66□□□□□ -1.5
TRIM38O00635 RN7SKP145-201ENST00000363291 303 ntBASIC5.66□□□□□ -1.5
TRIM38O00635 U3.7-201ENST00000363668 216 ntBASIC5.66□□□□□ -1.5
TRIM38O00635 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.66□□□□□ -1.5
TRIM38O00635 RNU6-225P-201ENST00000384613 103 ntBASIC5.66□□□□□ -1.5
TRIM38O00635 MIR142-201ENST00000384835 87 ntBASIC5.66□□□□□ -1.5
TRIM38O00635 PEX12P1-201ENST00000400284 1048 ntBASIC5.66□□□□□ -1.5
TRIM38O00635 ATF1P1-201ENST00000406040 927 ntBASIC5.66□□□□□ -1.5
TRIM38O00635 SPTLC1P2-201ENST00000407089 121 ntBASIC5.66□□□□□ -1.5
TRIM38O00635 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.66□□□□□ -1.5
TRIM38O00635 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.66□□□□□ -1.5
TRIM38O00635 DEFB130D-201ENST00000426866 237 ntBASIC5.66□□□□□ -1.5
TRIM38O00635 FO393414.1-201ENST00000428697 1184 ntBASIC5.66□□□□□ -1.5
TRIM38O00635 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.66□□□□□ -1.5
TRIM38O00635 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.66□□□□□ -1.5
TRIM38O00635 AC023141.8-201ENST00000442554 208 ntBASIC5.66□□□□□ -1.5
TRIM38O00635 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.66□□□□□ -1.5
TRIM38O00635 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.66□□□□□ -1.5
TRIM38O00635 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM38O00635 AC011225.1-201ENST00000457751 369 ntBASIC5.66□□□□□ -1.5
TRIM38O00635 COPS8P2-201ENST00000473228 627 ntBASIC5.66□□□□□ -1.5
TRIM38O00635 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM38O00635 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.66□□□□□ -1.5
TRIM38O00635 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.66□□□□□ -1.5
TRIM38O00635 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.66□□□□□ -1.5
TRIM38O00635 EIF4A2P5-201ENST00000529914 499 ntBASIC5.66□□□□□ -1.5
TRIM38O00635 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.66□□□□□ -1.5
TRIM38O00635 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.66□□□□□ -1.5
TRIM38O00635 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.66□□□□□ -1.5
TRIM38O00635 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.66□□□□□ -1.5
TRIM38O00635 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
TRIM38O00635 AC010735.1-201ENST00000567305 1026 ntBASIC5.66□□□□□ -1.5
TRIM38O00635 AC090666.1-201ENST00000578241 445 ntBASIC5.66□□□□□ -1.5
TRIM38O00635 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.66□□□□□ -1.5
TRIM38O00635 MIR4260-201ENST00000583107 67 ntBASIC5.66□□□□□ -1.5
TRIM38O00635 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.66□□□□□ -1.5
TRIM38O00635 AC011492.1-201ENST00000600023 315 ntBASIC5.66□□□□□ -1.5
TRIM38O00635 IMMP1LP3-201ENST00000604197 224 ntBASIC5.66□□□□□ -1.5
TRIM38O00635 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.66□□□□□ -1.5
TRIM38O00635 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.66□□□□□ -1.5
TRIM38O00635 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.66□□□□□ -1.5
TRIM38O00635 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM38O00635 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
TRIM38O00635 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.66□□□□□ -1.5
TRIM38O00635 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM38O00635 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms