Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 UGT2B26P-201ENST00000508672 1613 ntBASIC5.45□□□□□ -1.54
TBC1D3FA6NER0 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 RNU1-43P-201ENST00000365052 165 ntBASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 RPL23AP27-201ENST00000415161 451 ntBASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 HMGB3P10-201ENST00000434734 572 ntBASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 AL672138.1-201ENST00000450604 1015 ntBASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 RPSAP50-201ENST00000481955 852 ntBASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 AC093270.2-201ENST00000486157 792 ntBASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 AC004453.1-201ENST00000487895 408 ntBASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 NDUFA5P12-201ENST00000503796 343 ntBASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 SNORA19.3-201ENST00000516165 130 ntBASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 AC022832.1-201ENST00000530718 645 ntBASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 MIR4509-3-201ENST00000578671 94 ntBASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 MIR4509-2-201ENST00000583920 94 ntBASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 AL022067.1-201ENST00000602426 454 ntBASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 AC007938.2-201ENST00000604666 2634 ntBASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 AC013244.3-201ENST00000605614 388 ntBASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 AL356274.1-201ENST00000617064 410 ntBASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 AC109583.2-201ENST00000617367 129 ntBASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 MIR4509-1-201ENST00000618224 94 ntBASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 AP000770.2-201ENST00000623694 100 ntBASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 AL078595.3-201ENST00000623815 1166 ntBASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.44□□□□□ -1.54
TBC1D3FA6NER0 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TBC1D3FA6NER0 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
TBC1D3FA6NER0 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
TBC1D3FA6NER0 AC125336.1-201ENST00000508893 2827 ntBASIC5.43□□□□□ -1.54
TBC1D3FA6NER0 AL355834.1-201ENST00000556602 3965 ntBASIC5.43□□□□□ -1.54
TBC1D3FA6NER0 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TBC1D3FA6NER0 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TBC1D3FA6NER0 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TBC1D3FA6NER0 AC015799.1-201ENST00000622996 3122 ntBASIC5.43□□□□□ -1.54
TBC1D3FA6NER0 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.43□□□□□ -1.54
TBC1D3FA6NER0 REREP1Y-201ENST00000422655 198 ntBASIC5.43□□□□□ -1.54
TBC1D3FA6NER0 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.43□□□□□ -1.54
TBC1D3FA6NER0 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
TBC1D3FA6NER0 AC108075.1-201ENST00000424692 529 ntBASIC5.43□□□□□ -1.54
TBC1D3FA6NER0 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC5.43□□□□□ -1.54
TBC1D3FA6NER0 NPM1P22-201ENST00000427761 952 ntBASIC5.43□□□□□ -1.54
TBC1D3FA6NER0 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.43□□□□□ -1.54
TBC1D3FA6NER0 AC005033.1-201ENST00000428904 813 ntBASIC5.43□□□□□ -1.54
TBC1D3FA6NER0 RPL7P56-201ENST00000429441 717 ntBASIC5.43□□□□□ -1.54
TBC1D3FA6NER0 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TBC1D3FA6NER0 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.43□□□□□ -1.54
TBC1D3FA6NER0 CLUHP1-201ENST00000435012 1190 ntBASIC5.43□□□□□ -1.54
TBC1D3FA6NER0 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TBC1D3FA6NER0 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.43□□□□□ -1.54
TBC1D3FA6NER0 REREP2Y-201ENST00000439103 200 ntBASIC5.43□□□□□ -1.54
TBC1D3FA6NER0 ARAFP2-201ENST00000440565 559 ntBASIC5.43□□□□□ -1.54
TBC1D3FA6NER0 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC5.43□□□□□ -1.54
TBC1D3FA6NER0 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.43□□□□□ -1.54
TBC1D3FA6NER0 IGBP1P3-201ENST00000447449 1000 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms