Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 DUTP1-201ENST00000493631 470 ntBASIC5.95□□□□□ -1.46
SSX2IPQ9Y2D8 RPL15P21-201ENST00000495592 567 ntBASIC5.95□□□□□ -1.46
SSX2IPQ9Y2D8 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.95□□□□□ -1.46
SSX2IPQ9Y2D8 AC105420.1-201ENST00000504389 582 ntBASIC5.95□□□□□ -1.46
SSX2IPQ9Y2D8 PGAM1P13-201ENST00000507497 754 ntBASIC5.95□□□□□ -1.46
SSX2IPQ9Y2D8 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.95□□□□□ -1.46
SSX2IPQ9Y2D8 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
SSX2IPQ9Y2D8 TOMM22P4-201ENST00000511318 336 ntBASIC5.95□□□□□ -1.46
SSX2IPQ9Y2D8 snoU109.5-201ENST00000516231 132 ntBASIC5.95□□□□□ -1.46
SSX2IPQ9Y2D8 AC078899.1-201ENST00000521432 1185 ntBASIC5.95□□□□□ -1.46
SSX2IPQ9Y2D8 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.95□□□□□ -1.46
SSX2IPQ9Y2D8 AL512310.9-201ENST00000553311 948 ntBASIC5.95□□□□□ -1.46
SSX2IPQ9Y2D8 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.95□□□□□ -1.46
SSX2IPQ9Y2D8 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.95□□□□□ -1.46
SSX2IPQ9Y2D8 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SSX2IPQ9Y2D8 AC073429.2-201ENST00000569694 1444 ntBASIC5.95□□□□□ -1.46
SSX2IPQ9Y2D8 AC124283.4-201ENST00000581815 456 ntBASIC5.95□□□□□ -1.46
SSX2IPQ9Y2D8 AC060780.2-201ENST00000589047 198 ntBASIC5.95□□□□□ -1.46
SSX2IPQ9Y2D8 AC006272.2-201ENST00000594725 163 ntBASIC5.95□□□□□ -1.46
SSX2IPQ9Y2D8 AC079880.2-201ENST00000603790 1213 ntBASIC5.95□□□□□ -1.46
SSX2IPQ9Y2D8 OR5AC4P-202ENST00000642086 985 ntBASIC5.95□□□□□ -1.46
SSX2IPQ9Y2D8 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SSX2IPQ9Y2D8 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
SSX2IPQ9Y2D8 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SSX2IPQ9Y2D8 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SSX2IPQ9Y2D8 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SSX2IPQ9Y2D8 AL359715.3-201ENST00000569267 2123 ntBASIC5.95□□□□□ -1.46
SSX2IPQ9Y2D8 AC005224.3-201ENST00000584683 2140 ntBASIC5.95□□□□□ -1.46
SSX2IPQ9Y2D8 HSPD1P7-201ENST00000447985 1686 ntBASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 AL022322.2-201ENST00000624072 20397 ntBASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 RNU6-354P-201ENST00000383862 107 ntBASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 RNU6-610P-201ENST00000384264 107 ntBASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 SNORD65-201ENST00000391079 73 ntBASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 AL645927.1-201ENST00000396783 406 ntBASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 TAF9BP2-201ENST00000400856 499 ntBASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 HMGB3P19-201ENST00000403971 560 ntBASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 AL009179.1-201ENST00000406085 265 ntBASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 AC096533.1-201ENST00000411645 353 ntBASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 AC099670.2-201ENST00000435130 321 ntBASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 AC006994.1-201ENST00000438212 839 ntBASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 RPS11P7-201ENST00000442125 465 ntBASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 AC105399.1-202ENST00000447303 205 ntBASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 AL157884.3-201ENST00000448273 1184 ntBASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 HMGB1P26-201ENST00000452520 628 ntBASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 RSU1P1-201ENST00000453416 441 ntBASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 AC005532.2-201ENST00000467154 373 ntBASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 AC091544.1-201ENST00000484702 348 ntBASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 AC072052.1-201ENST00000496556 306 ntBASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 AC008427.1-201ENST00000503102 655 ntBASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 SUMO2P5-201ENST00000506790 245 ntBASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 LRRC34P1-201ENST00000542742 915 ntBASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 AC000068.2-201ENST00000608816 460 ntBASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 AC025574.2-201ENST00000615621 514 ntBASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 AL512427.1-201ENST00000618593 349 ntBASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 MFSD8-239ENST00000641590 2479 ntBASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.94□□□□□ -1.46
SSX2IPQ9Y2D8 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 AC114774.1-201ENST00000507410 1770 ntBASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 RNA5SP187-201ENST00000384400 119 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms