Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 RN7SKP104-201ENST00000362605 328 ntBASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 U3.3-201ENST00000362986 216 ntBASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 MIR589-201ENST00000385238 99 ntBASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 EI24P4-201ENST00000423683 1078 ntBASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 RPS4XP16-201ENST00000427198 791 ntBASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 AL049745.1-201ENST00000433953 286 ntBASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 GAPDHP14-201ENST00000450472 937 ntBASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 RPS3AP53-201ENST00000454716 778 ntBASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 AL356390.1-201ENST00000455684 397 ntBASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 AC107015.1-201ENST00000466902 747 ntBASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 RN7SKP260-201ENST00000516907 149 ntBASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 AC018442.3-201ENST00000523025 183 ntBASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 OR5AZ1P-201ENST00000527448 943 ntBASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 MTCYBP13-201ENST00000578634 1093 ntBASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 AC011487.3-201ENST00000593607 453 ntBASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 AL590410.1-201ENST00000617925 333 ntBASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 AL391597.1-201ENST00000618707 694 ntBASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 FRG1EP-201ENST00000634469 770 ntBASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 INTS6P1-201ENST00000504674 2530 ntBASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 AC022417.1-201ENST00000624768 1303 ntBASIC4.72□□□□□ -1.65
NPIPA1Q9UND3 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
NPIPA1Q9UND3 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
NPIPA1Q9UND3 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
NPIPA1Q9UND3 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
NPIPA1Q9UND3 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 RNA5SP90-201ENST00000364801 99 ntBASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 AC007618.1-201ENST00000366455 732 ntBASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 RPL21P67-201ENST00000402896 478 ntBASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 MIR1182-201ENST00000408363 97 ntBASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 RPL12P9-201ENST00000412942 488 ntBASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 RPA2P2-201ENST00000419698 796 ntBASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 RAB28P3-201ENST00000448325 597 ntBASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 TRY2P-201ENST00000448860 689 ntBASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 HMGN2P25-201ENST00000486956 268 ntBASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 RN7SL814P-201ENST00000487715 300 ntBASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 AC016559.2-201ENST00000510759 359 ntBASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 RNU6-319P-201ENST00000516025 108 ntBASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 SETP1-201ENST00000556014 845 ntBASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 AC011626.1-201ENST00000604710 562 ntBASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 AC087783.2-201ENST00000605070 562 ntBASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 AC012213.4-201ENST00000606457 354 ntBASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 AL592494.3-201ENST00000609485 464 ntBASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 TMEM30CP-203ENST00000637814 1035 ntBASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
NPIPA1Q9UND3 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.7□□□□□ -1.66
NPIPA1Q9UND3 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms