Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS4AQ9UN37 AC084373.1-201ENST00000603311 235 ntBASIC5.49□□□□□ -1.53
VPS4AQ9UN37 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS4AQ9UN37 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS4AQ9UN37 AC005618.4-201ENST00000625053 554 ntBASIC5.49□□□□□ -1.53
VPS4AQ9UN37 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS4AQ9UN37 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS4AQ9UN37 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
VPS4AQ9UN37 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.49□□□□□ -1.53
VPS4AQ9UN37 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.49□□□□□ -1.53
VPS4AQ9UN37 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VPS4AQ9UN37 AP005432.1-201ENST00000580891 3485 ntBASIC5.49□□□□□ -1.53
VPS4AQ9UN37 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.49□□□□□ -1.53
VPS4AQ9UN37 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
VPS4AQ9UN37 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VPS4AQ9UN37 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
VPS4AQ9UN37 AL034546.1-201ENST00000623740 3693 ntBASIC5.49□□□□□ -1.53
VPS4AQ9UN37 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 AC007342.7-201ENST00000624610 2337 ntBASIC5.48□□□□□ -1.53
VPS4AQ9UN37 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 AC009962.1-201ENST00000567327 3813 ntBASIC5.48□□□□□ -1.53
VPS4AQ9UN37 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 AL672167.2-201ENST00000377164 879 ntBASIC5.48□□□□□ -1.53
VPS4AQ9UN37 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 RN7SKP59-201ENST00000410520 314 ntBASIC5.48□□□□□ -1.53
VPS4AQ9UN37 PCNPP4-201ENST00000414817 517 ntBASIC5.48□□□□□ -1.53
VPS4AQ9UN37 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 AC006065.1-201ENST00000422539 802 ntBASIC5.48□□□□□ -1.53
VPS4AQ9UN37 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 BX276092.6-201ENST00000430476 250 ntBASIC5.48□□□□□ -1.53
VPS4AQ9UN37 Z84478.1-201ENST00000438230 1219 ntBASIC5.48□□□□□ -1.53
VPS4AQ9UN37 PTMAP6-201ENST00000439110 327 ntBASIC5.48□□□□□ -1.53
VPS4AQ9UN37 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 AC000041.1-201ENST00000439655 175 ntBASIC5.48□□□□□ -1.53
VPS4AQ9UN37 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 BX276092.8-201ENST00000455722 250 ntBASIC5.48□□□□□ -1.53
VPS4AQ9UN37 AC099521.1-201ENST00000482557 334 ntBASIC5.48□□□□□ -1.53
VPS4AQ9UN37 AC231760.1-201ENST00000498002 260 ntBASIC5.48□□□□□ -1.53
VPS4AQ9UN37 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 AC026414.1-201ENST00000504046 698 ntBASIC5.48□□□□□ -1.53
VPS4AQ9UN37 AC025459.1-201ENST00000504072 156 ntBASIC5.48□□□□□ -1.53
VPS4AQ9UN37 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 RNU6-276P-201ENST00000516114 96 ntBASIC5.48□□□□□ -1.53
VPS4AQ9UN37 AC027026.1-201ENST00000532323 742 ntBASIC5.48□□□□□ -1.53
VPS4AQ9UN37 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 SNX6P1-201ENST00000601728 1224 ntBASIC5.48□□□□□ -1.53
VPS4AQ9UN37 AC093424.1-201ENST00000604999 338 ntBASIC5.48□□□□□ -1.53
VPS4AQ9UN37 AC116651.1-201ENST00000609724 556 ntBASIC5.48□□□□□ -1.53
VPS4AQ9UN37 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 AL359513.1-201ENST00000614364 557 ntBASIC5.48□□□□□ -1.53
VPS4AQ9UN37 AC015712.7-201ENST00000615211 635 ntBASIC5.48□□□□□ -1.53
VPS4AQ9UN37 RMST_10.1-201ENST00000616309 154 ntBASIC5.48□□□□□ -1.53
VPS4AQ9UN37 AC008115.4-201ENST00000619780 775 ntBASIC5.48□□□□□ -1.53
VPS4AQ9UN37 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 AC105105.5-201ENST00000622635 1294 ntBASIC5.48□□□□□ -1.53
VPS4AQ9UN37 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS4AQ9UN37 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
VPS4AQ9UN37 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.47□□□□□ -1.53
VPS4AQ9UN37 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.47□□□□□ -1.53
VPS4AQ9UN37 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
VPS4AQ9UN37 PDZK1P1-202ENST00000425209 1350 ntBASIC5.47□□□□□ -1.53
VPS4AQ9UN37 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VPS4AQ9UN37 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
VPS4AQ9UN37 RNU1-136P-201ENST00000384181 164 ntBASIC5.47□□□□□ -1.53
VPS4AQ9UN37 AF228730.1-201ENST00000397972 663 ntBASIC5.47□□□□□ -1.53
VPS4AQ9UN37 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.47□□□□□ -1.53
VPS4AQ9UN37 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.47□□□□□ -1.53
VPS4AQ9UN37 Y_RNA.625-201ENST00000411256 107 ntBASIC5.47□□□□□ -1.53
VPS4AQ9UN37 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.47□□□□□ -1.53
VPS4AQ9UN37 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms