Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PPARGC1AQ9UBK2 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PPARGC1AQ9UBK2 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.28□□□□□ -1.4
PPARGC1AQ9UBK2 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.28□□□□□ -1.4
PPARGC1AQ9UBK2 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
PPARGC1AQ9UBK2 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PPARGC1AQ9UBK2 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 TTC39DP-201ENST00000416781 1688 ntBASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 AL035419.1-201ENST00000397037 564 ntBASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 SCP2-206ENST00000430330 938 ntTSL 2 BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 MTCYBP3-201ENST00000445588 1137 ntBASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 ZNF619P1-201ENST00000446539 752 ntBASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 RBMY2TP-201ENST00000451162 947 ntBASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 snoU13.29-201ENST00000459370 104 ntBASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 RN7SL352P-201ENST00000466002 277 ntBASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 RPL37P23-201ENST00000492641 294 ntBASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 AC011352.1-201ENST00000512300 793 ntBASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 RN7SKP70-201ENST00000516655 271 ntBASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 RNU6-759P-201ENST00000516740 103 ntBASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 AC068305.2-201ENST00000550567 1205 ntBASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 MIR5708-201ENST00000579723 85 ntBASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 AC119403.2-201ENST00000590960 598 ntBASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 AL392112.1-201ENST00000605115 829 ntBASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 AC096553.1-201ENST00000605169 829 ntBASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 AC104073.3-201ENST00000610942 955 ntBASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 AL592148.2-201ENST00000612210 372 ntBASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 STMN1P1-201ENST00000617809 440 ntBASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 AL357562.1-201ENST00000624911 609 ntBASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 MFSD8-245ENST00000641743 948 ntBASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 AC022164.1-201ENST00000568767 2673 ntBASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 AC016583.1-201ENST00000624221 2431 ntBASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 ZNF733P-202ENST00000444809 1573 ntBASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.27□□□□□ -1.41
PPARGC1AQ9UBK2 AP000432.2-201ENST00000624164 2048 ntBASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 MTCO1P7-201ENST00000419523 1542 ntBASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 COX6B1P3-201ENST00000312310 260 ntBASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 RNA5SP375-201ENST00000362975 119 ntBASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 MT-TP-201ENST00000387461 68 ntBASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 VN1R12P-201ENST00000403778 876 ntBASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 MTND4P6-201ENST00000438297 472 ntBASIC6.26□□□□□ -1.41
PPARGC1AQ9UBK2 AL606662.1-201ENST00000445763 553 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms