Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 GDI2P2-201ENST00000445131 608 ntBASIC6.44□□□□□ -1.38
SSU72Q9NP77 AC005517.1-201ENST00000452091 489 ntBASIC6.44□□□□□ -1.38
SSU72Q9NP77 SNORD42A-201ENST00000459584 64 ntBASIC6.44□□□□□ -1.38
SSU72Q9NP77 DAP3-209ENST00000465375 729 ntTSL 2 BASIC6.44□□□□□ -1.38
SSU72Q9NP77 RN7SL390P-201ENST00000470634 284 ntBASIC6.44□□□□□ -1.38
SSU72Q9NP77 AC022415.1-202ENST00000486612 523 ntBASIC6.44□□□□□ -1.38
SSU72Q9NP77 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC6.44□□□□□ -1.38
SSU72Q9NP77 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC6.44□□□□□ -1.38
SSU72Q9NP77 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC6.44□□□□□ -1.38
SSU72Q9NP77 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.44□□□□□ -1.38
SSU72Q9NP77 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSU72Q9NP77 IGJP1-201ENST00000522682 475 ntBASIC6.44□□□□□ -1.38
SSU72Q9NP77 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC6.44□□□□□ -1.38
SSU72Q9NP77 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.44□□□□□ -1.38
SSU72Q9NP77 PPIAP14-201ENST00000577627 496 ntBASIC6.44□□□□□ -1.38
SSU72Q9NP77 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC6.44□□□□□ -1.38
SSU72Q9NP77 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.44□□□□□ -1.38
SSU72Q9NP77 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.44□□□□□ -1.38
SSU72Q9NP77 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC6.44□□□□□ -1.38
SSU72Q9NP77 AL390208.1-201ENST00000605885 644 ntBASIC6.44□□□□□ -1.38
SSU72Q9NP77 AC128687.2-201ENST00000609657 566 ntBASIC6.44□□□□□ -1.38
SSU72Q9NP77 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSU72Q9NP77 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SSU72Q9NP77 AC006328.2-201ENST00000623198 397 ntBASIC6.44□□□□□ -1.38
SSU72Q9NP77 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6.44□□□□□ -1.38
SSU72Q9NP77 AC012005.2-201ENST00000624333 397 ntBASIC6.44□□□□□ -1.38
SSU72Q9NP77 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SSU72Q9NP77 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SSU72Q9NP77 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSU72Q9NP77 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC6.44□□□□□ -1.38
SSU72Q9NP77 AL137058.3-201ENST00000624531 3099 ntBASIC6.44□□□□□ -1.38
SSU72Q9NP77 AC007114.2-201ENST00000576014 4281 ntBASIC6.44□□□□□ -1.38
SSU72Q9NP77 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SSU72Q9NP77 LYARP1-201ENST00000436977 1501 ntBASIC6.44□□□□□ -1.38
SSU72Q9NP77 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SSU72Q9NP77 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.44□□□□□ -1.38
SSU72Q9NP77 AC011447.7-201ENST00000624228 1590 ntBASIC6.44□□□□□ -1.38
SSU72Q9NP77 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSU72Q9NP77 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SSU72Q9NP77 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.43□□□□□ -1.38
SSU72Q9NP77 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.43□□□□□ -1.38
SSU72Q9NP77 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
SSU72Q9NP77 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SSU72Q9NP77 AC139426.3-201ENST00000605648 2059 ntBASIC6.43□□□□□ -1.38
SSU72Q9NP77 AC010329.1-201ENST00000593903 8328 ntBASIC6.43□□□□□ -1.38
SSU72Q9NP77 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SSU72Q9NP77 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.43□□□□□ -1.38
SSU72Q9NP77 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.43□□□□□ -1.38
SSU72Q9NP77 AC110716.2-201ENST00000563865 3945 ntBASIC6.43□□□□□ -1.38
SSU72Q9NP77 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.43□□□□□ -1.38
SSU72Q9NP77 ZNF680P1-201ENST00000436625 1469 ntBASIC6.43□□□□□ -1.38
SSU72Q9NP77 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.43□□□□□ -1.38
SSU72Q9NP77 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.43□□□□□ -1.38
SSU72Q9NP77 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
SSU72Q9NP77 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SSU72Q9NP77 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC6.43□□□□□ -1.38
SSU72Q9NP77 RPL11P4-201ENST00000332269 436 ntBASIC6.43□□□□□ -1.38
SSU72Q9NP77 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
SSU72Q9NP77 Y_RNA.38-201ENST00000362617 102 ntBASIC6.43□□□□□ -1.38
SSU72Q9NP77 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.43□□□□□ -1.38
SSU72Q9NP77 SNORA30B-201ENST00000365319 129 ntBASIC6.43□□□□□ -1.38
SSU72Q9NP77 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SSU72Q9NP77 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC6.43□□□□□ -1.38
SSU72Q9NP77 MIR217-201ENST00000384817 110 ntBASIC6.43□□□□□ -1.38
SSU72Q9NP77 MIR525-201ENST00000384978 85 ntBASIC6.43□□□□□ -1.38
SSU72Q9NP77 RNU2-42P-201ENST00000410697 113 ntBASIC6.43□□□□□ -1.38
SSU72Q9NP77 AC012498.1-201ENST00000424037 437 ntBASIC6.43□□□□□ -1.38
SSU72Q9NP77 AL034418.1-201ENST00000448675 860 ntBASIC6.43□□□□□ -1.38
SSU72Q9NP77 AC092967.1-201ENST00000449016 481 ntBASIC6.43□□□□□ -1.38
SSU72Q9NP77 PCMTD1P3-201ENST00000451824 472 ntBASIC6.43□□□□□ -1.38
SSU72Q9NP77 RPS27AP3-201ENST00000453803 454 ntBASIC6.43□□□□□ -1.38
SSU72Q9NP77 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.43□□□□□ -1.38
SSU72Q9NP77 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.43□□□□□ -1.38
SSU72Q9NP77 MTND1P11-201ENST00000456661 876 ntBASIC6.43□□□□□ -1.38
SSU72Q9NP77 AL445687.2-201ENST00000458156 728 ntBASIC6.43□□□□□ -1.38
SSU72Q9NP77 PSMC1P13-201ENST00000458195 985 ntBASIC6.43□□□□□ -1.38
SSU72Q9NP77 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC6.43□□□□□ -1.38
SSU72Q9NP77 AC122714.1-201ENST00000502510 459 ntBASIC6.43□□□□□ -1.38
SSU72Q9NP77 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.43□□□□□ -1.38
SSU72Q9NP77 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC6.43□□□□□ -1.38
SSU72Q9NP77 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SSU72Q9NP77 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.43□□□□□ -1.38
SSU72Q9NP77 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.43□□□□□ -1.38
SSU72Q9NP77 RNU6-1004P-201ENST00000516584 111 ntBASIC6.43□□□□□ -1.38
SSU72Q9NP77 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC6.43□□□□□ -1.38
SSU72Q9NP77 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC6.43□□□□□ -1.38
SSU72Q9NP77 AC008429.2-201ENST00000523057 864 ntBASIC6.43□□□□□ -1.38
SSU72Q9NP77 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SSU72Q9NP77 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.43□□□□□ -1.38
SSU72Q9NP77 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC6.43□□□□□ -1.38
SSU72Q9NP77 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC6.43□□□□□ -1.38
SSU72Q9NP77 CFL2-206ENST00000556161 546 ntTSL 4 BASIC6.43□□□□□ -1.38
SSU72Q9NP77 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC6.43□□□□□ -1.38
SSU72Q9NP77 AC006960.3-201ENST00000561845 705 ntBASIC6.43□□□□□ -1.38
SSU72Q9NP77 PCMTD1P2-201ENST00000565017 355 ntBASIC6.43□□□□□ -1.38
SSU72Q9NP77 UBE2FP2-201ENST00000566646 462 ntBASIC6.43□□□□□ -1.38
SSU72Q9NP77 MIR3189-201ENST00000578735 73 ntBASIC6.43□□□□□ -1.38
SSU72Q9NP77 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.43□□□□□ -1.38
SSU72Q9NP77 AC090616.5-202ENST00000582111 297 ntBASIC6.43□□□□□ -1.38
SSU72Q9NP77 MYLK-221ENST00000583087 678 ntTSL 4 BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms