Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 ELOCP12-201ENST00000458706 328 ntBASIC5.31□□□□□ -1.56
PCDH9Q9HC56 AC092905.1-201ENST00000467527 949 ntBASIC5.31□□□□□ -1.56
PCDH9Q9HC56 COPS8P2-201ENST00000473228 627 ntBASIC5.31□□□□□ -1.56
PCDH9Q9HC56 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDH9Q9HC56 AC092902.1-201ENST00000486999 259 ntBASIC5.31□□□□□ -1.56
PCDH9Q9HC56 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDH9Q9HC56 RPS4XP20-201ENST00000505751 772 ntBASIC5.31□□□□□ -1.56
PCDH9Q9HC56 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDH9Q9HC56 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDH9Q9HC56 AC105031.1-201ENST00000518550 476 ntBASIC5.31□□□□□ -1.56
PCDH9Q9HC56 AC092868.3-201ENST00000560515 784 ntBASIC5.31□□□□□ -1.56
PCDH9Q9HC56 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDH9Q9HC56 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDH9Q9HC56 MIMT1-201ENST00000597105 1050 ntBASIC5.31□□□□□ -1.56
PCDH9Q9HC56 AL391834.1-201ENST00000609609 560 ntBASIC5.31□□□□□ -1.56
PCDH9Q9HC56 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDH9Q9HC56 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDH9Q9HC56 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDH9Q9HC56 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
PCDH9Q9HC56 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDH9Q9HC56 AL731532.2-201ENST00000623542 1953 ntBASIC5.31□□□□□ -1.56
PCDH9Q9HC56 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDH9Q9HC56 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDH9Q9HC56 AC011493.1-201ENST00000596753 1632 ntBASIC5.3□□□□□ -1.56
PCDH9Q9HC56 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
PCDH9Q9HC56 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDH9Q9HC56 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDH9Q9HC56 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDH9Q9HC56 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDH9Q9HC56 MIR365B-201ENST00000362317 111 ntBASIC5.3□□□□□ -1.56
PCDH9Q9HC56 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
PCDH9Q9HC56 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDH9Q9HC56 GCNT6-201ENST00000379591 934 ntBASIC5.3□□□□□ -1.56
PCDH9Q9HC56 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDH9Q9HC56 AP000534.2-201ENST00000412729 568 ntBASIC5.3□□□□□ -1.56
PCDH9Q9HC56 AL121882.1-201ENST00000422893 417 ntBASIC5.3□□□□□ -1.56
PCDH9Q9HC56 AL139148.1-201ENST00000427122 680 ntBASIC5.3□□□□□ -1.56
PCDH9Q9HC56 OR52B5P-201ENST00000435337 951 ntBASIC5.3□□□□□ -1.56
PCDH9Q9HC56 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDH9Q9HC56 RPS29P10-201ENST00000439197 166 ntBASIC5.3□□□□□ -1.56
PCDH9Q9HC56 ARL5AP3-201ENST00000439327 386 ntBASIC5.3□□□□□ -1.56
PCDH9Q9HC56 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.3□□□□□ -1.56
PCDH9Q9HC56 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDH9Q9HC56 BTF3P6-201ENST00000448054 499 ntBASIC5.3□□□□□ -1.56
PCDH9Q9HC56 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDH9Q9HC56 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDH9Q9HC56 RPS26P39-201ENST00000469206 341 ntBASIC5.3□□□□□ -1.56
PCDH9Q9HC56 AC108729.2-201ENST00000476543 840 ntBASIC5.3□□□□□ -1.56
PCDH9Q9HC56 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDH9Q9HC56 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDH9Q9HC56 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDH9Q9HC56 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDH9Q9HC56 AC012400.1-201ENST00000518452 381 ntBASIC5.3□□□□□ -1.56
PCDH9Q9HC56 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDH9Q9HC56 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDH9Q9HC56 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDH9Q9HC56 AC127381.1-201ENST00000555979 939 ntBASIC5.3□□□□□ -1.56
PCDH9Q9HC56 AC027176.2-201ENST00000559166 746 ntBASIC5.3□□□□□ -1.56
PCDH9Q9HC56 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDH9Q9HC56 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDH9Q9HC56 AP003117.1-201ENST00000602771 554 ntBASIC5.3□□□□□ -1.56
PCDH9Q9HC56 BNIP3P31-201ENST00000604515 566 ntBASIC5.3□□□□□ -1.56
PCDH9Q9HC56 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDH9Q9HC56 MIR6826-201ENST00000617808 98 ntBASIC5.3□□□□□ -1.56
PCDH9Q9HC56 AC090527.3-201ENST00000619041 548 ntBASIC5.3□□□□□ -1.56
PCDH9Q9HC56 OR52B5P-202ENST00000641118 1110 ntBASIC5.3□□□□□ -1.56
PCDH9Q9HC56 AC063976.2-201ENST00000425667 3556 ntBASIC5.3□□□□□ -1.56
PCDH9Q9HC56 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDH9Q9HC56 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
PCDH9Q9HC56 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDH9Q9HC56 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDH9Q9HC56 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDH9Q9HC56 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDH9Q9HC56 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDH9Q9HC56 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDH9Q9HC56 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
PCDH9Q9HC56 OR9K1P-202ENST00000641111 3217 ntBASIC5.29□□□□□ -1.56
PCDH9Q9HC56 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDH9Q9HC56 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.29□□□□□ -1.56
PCDH9Q9HC56 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PCDH9Q9HC56 U3.2-201ENST00000362981 210 ntBASIC5.29□□□□□ -1.56
PCDH9Q9HC56 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDH9Q9HC56 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDH9Q9HC56 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDH9Q9HC56 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDH9Q9HC56 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.29□□□□□ -1.56
PCDH9Q9HC56 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.29□□□□□ -1.56
PCDH9Q9HC56 NANOGP4-201ENST00000427230 913 ntBASIC5.29□□□□□ -1.56
PCDH9Q9HC56 COX6CP13-201ENST00000428703 226 ntBASIC5.29□□□□□ -1.56
PCDH9Q9HC56 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDH9Q9HC56 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDH9Q9HC56 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDH9Q9HC56 Z92846.1-201ENST00000456203 268 ntBASIC5.29□□□□□ -1.56
PCDH9Q9HC56 AC091180.1-201ENST00000462104 372 ntBASIC5.29□□□□□ -1.56
PCDH9Q9HC56 AC010468.3-201ENST00000508225 458 ntBASIC5.29□□□□□ -1.56
PCDH9Q9HC56 FABP5P6-201ENST00000510588 409 ntBASIC5.29□□□□□ -1.56
PCDH9Q9HC56 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDH9Q9HC56 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.29□□□□□ -1.56
PCDH9Q9HC56 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDH9Q9HC56 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms