Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.64□□□□□ -1.51
USP29Q9HBJ7 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.64□□□□□ -1.51
USP29Q9HBJ7 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.64□□□□□ -1.51
USP29Q9HBJ7 AC092447.2-201ENST00000435487 669 ntBASIC5.64□□□□□ -1.51
USP29Q9HBJ7 OR6D1P-201ENST00000436165 939 ntBASIC5.64□□□□□ -1.51
USP29Q9HBJ7 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.64□□□□□ -1.51
USP29Q9HBJ7 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.64□□□□□ -1.51
USP29Q9HBJ7 VDAC2P4-201ENST00000452925 711 ntBASIC5.64□□□□□ -1.51
USP29Q9HBJ7 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.64□□□□□ -1.51
USP29Q9HBJ7 AC239798.3-201ENST00000454459 408 ntBASIC5.64□□□□□ -1.51
USP29Q9HBJ7 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC5.64□□□□□ -1.51
USP29Q9HBJ7 RN7SL72P-201ENST00000460697 269 ntBASIC5.64□□□□□ -1.51
USP29Q9HBJ7 COPS8P2-201ENST00000473228 627 ntBASIC5.64□□□□□ -1.51
USP29Q9HBJ7 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.64□□□□□ -1.51
USP29Q9HBJ7 HAUS1P3-201ENST00000523909 662 ntBASIC5.64□□□□□ -1.51
USP29Q9HBJ7 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.64□□□□□ -1.51
USP29Q9HBJ7 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.64□□□□□ -1.51
USP29Q9HBJ7 RBM22P12-201ENST00000567098 1255 ntBASIC5.64□□□□□ -1.51
USP29Q9HBJ7 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.64□□□□□ -1.51
USP29Q9HBJ7 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.64□□□□□ -1.51
USP29Q9HBJ7 RPP40P2-201ENST00000603596 712 ntBASIC5.64□□□□□ -1.51
USP29Q9HBJ7 AP000484.1-201ENST00000620067 1252 ntBASIC5.64□□□□□ -1.51
USP29Q9HBJ7 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC5.64□□□□□ -1.51
USP29Q9HBJ7 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.64□□□□□ -1.51
USP29Q9HBJ7 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.64□□□□□ -1.51
USP29Q9HBJ7 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.64□□□□□ -1.51
USP29Q9HBJ7 AC008432.1-201ENST00000615912 1320 ntBASIC5.64□□□□□ -1.51
USP29Q9HBJ7 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
USP29Q9HBJ7 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
USP29Q9HBJ7 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.64□□□□□ -1.51
USP29Q9HBJ7 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.64□□□□□ -1.51
USP29Q9HBJ7 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
USP29Q9HBJ7 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
USP29Q9HBJ7 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.64□□□□□ -1.51
USP29Q9HBJ7 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
USP29Q9HBJ7 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.64□□□□□ -1.51
USP29Q9HBJ7 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
USP29Q9HBJ7 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
USP29Q9HBJ7 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
USP29Q9HBJ7 AC010132.2-201ENST00000295493 1043 ntBASIC5.63□□□□□ -1.51
USP29Q9HBJ7 U3.7-201ENST00000363668 216 ntBASIC5.63□□□□□ -1.51
USP29Q9HBJ7 RNU6-481P-201ENST00000384194 107 ntBASIC5.63□□□□□ -1.51
USP29Q9HBJ7 AF228730.1-201ENST00000397972 663 ntBASIC5.63□□□□□ -1.51
USP29Q9HBJ7 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.63□□□□□ -1.51
USP29Q9HBJ7 TATDN1P1-201ENST00000414123 891 ntBASIC5.63□□□□□ -1.51
USP29Q9HBJ7 OR6E1P-201ENST00000414424 923 ntBASIC5.63□□□□□ -1.51
USP29Q9HBJ7 PTP4A1P7-201ENST00000423476 514 ntBASIC5.63□□□□□ -1.51
USP29Q9HBJ7 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC5.63□□□□□ -1.51
USP29Q9HBJ7 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.63□□□□□ -1.51
USP29Q9HBJ7 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.63□□□□□ -1.51
USP29Q9HBJ7 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
USP29Q9HBJ7 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.63□□□□□ -1.51
USP29Q9HBJ7 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.63□□□□□ -1.51
USP29Q9HBJ7 AL035090.1-201ENST00000454835 332 ntBASIC5.63□□□□□ -1.51
USP29Q9HBJ7 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
USP29Q9HBJ7 CBX1P5-201ENST00000475330 559 ntBASIC5.63□□□□□ -1.51
USP29Q9HBJ7 RN7SL799P-201ENST00000475891 298 ntBASIC5.63□□□□□ -1.51
USP29Q9HBJ7 RPL7P39-201ENST00000481157 744 ntBASIC5.63□□□□□ -1.51
USP29Q9HBJ7 RN7SL184P-201ENST00000488308 297 ntBASIC5.63□□□□□ -1.51
USP29Q9HBJ7 AC105233.1-201ENST00000498840 781 ntBASIC5.63□□□□□ -1.51
USP29Q9HBJ7 SUMO2P4-201ENST00000504193 276 ntBASIC5.63□□□□□ -1.51
USP29Q9HBJ7 AC002456.2-201ENST00000509356 380 ntBASIC5.63□□□□□ -1.51
USP29Q9HBJ7 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.63□□□□□ -1.51
USP29Q9HBJ7 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.63□□□□□ -1.51
USP29Q9HBJ7 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.63□□□□□ -1.51
USP29Q9HBJ7 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.63□□□□□ -1.51
USP29Q9HBJ7 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC5.63□□□□□ -1.51
USP29Q9HBJ7 NPM1P35-201ENST00000533043 868 ntBASIC5.63□□□□□ -1.51
USP29Q9HBJ7 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.63□□□□□ -1.51
USP29Q9HBJ7 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.63□□□□□ -1.51
USP29Q9HBJ7 CBX3P2-202ENST00000583365 535 ntBASIC5.63□□□□□ -1.51
USP29Q9HBJ7 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.63□□□□□ -1.51
USP29Q9HBJ7 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.63□□□□□ -1.51
USP29Q9HBJ7 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.63□□□□□ -1.51
USP29Q9HBJ7 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.63□□□□□ -1.51
USP29Q9HBJ7 BMS1P7-201ENST00000602440 1052 ntBASIC5.63□□□□□ -1.51
USP29Q9HBJ7 AC067838.1-201ENST00000606064 577 ntBASIC5.63□□□□□ -1.51
USP29Q9HBJ7 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.63□□□□□ -1.51
USP29Q9HBJ7 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.63□□□□□ -1.51
USP29Q9HBJ7 uc_338.7-201ENST00000621834 124 ntBASIC5.63□□□□□ -1.51
USP29Q9HBJ7 MIR6730-201ENST00000622213 67 ntBASIC5.63□□□□□ -1.51
USP29Q9HBJ7 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.63□□□□□ -1.51
USP29Q9HBJ7 AC007382.1-201ENST00000624376 2618 ntBASIC5.63□□□□□ -1.51
USP29Q9HBJ7 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
USP29Q9HBJ7 AC003973.3-201ENST00000624863 2822 ntBASIC5.63□□□□□ -1.51
USP29Q9HBJ7 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.63□□□□□ -1.51
USP29Q9HBJ7 AC114786.1-201ENST00000512892 1415 ntBASIC5.63□□□□□ -1.51
USP29Q9HBJ7 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.63□□□□□ -1.51
USP29Q9HBJ7 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
USP29Q9HBJ7 BCORP1-203ENST00000513194 5093 ntBASIC5.63□□□□□ -1.51
USP29Q9HBJ7 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
USP29Q9HBJ7 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.63□□□□□ -1.51
USP29Q9HBJ7 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
USP29Q9HBJ7 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.62□□□□□ -1.51
USP29Q9HBJ7 ABCC13-202ENST00000463099 3842 ntBASIC5.62□□□□□ -1.51
USP29Q9HBJ7 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
USP29Q9HBJ7 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
USP29Q9HBJ7 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
USP29Q9HBJ7 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
USP29Q9HBJ7 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms