Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.68□□□□□ -1.66
COL21A1Q96P44 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL21A1Q96P44 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.68□□□□□ -1.66
COL21A1Q96P44 RNU6-249P-201ENST00000363016 102 ntBASIC4.68□□□□□ -1.66
COL21A1Q96P44 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL21A1Q96P44 RNU1-106P-201ENST00000384382 164 ntBASIC4.68□□□□□ -1.66
COL21A1Q96P44 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.68□□□□□ -1.66
COL21A1Q96P44 MIR937-201ENST00000401271 86 ntBASIC4.68□□□□□ -1.66
COL21A1Q96P44 SPTLC1P2-201ENST00000407089 121 ntBASIC4.68□□□□□ -1.66
COL21A1Q96P44 AL445213.1-201ENST00000412589 747 ntBASIC4.68□□□□□ -1.66
COL21A1Q96P44 TMBIM7P-201ENST00000418074 855 ntBASIC4.68□□□□□ -1.66
COL21A1Q96P44 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.68□□□□□ -1.66
COL21A1Q96P44 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.68□□□□□ -1.66
COL21A1Q96P44 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.68□□□□□ -1.66
COL21A1Q96P44 BX323845.1-201ENST00000432417 179 ntBASIC4.68□□□□□ -1.66
COL21A1Q96P44 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.68□□□□□ -1.66
COL21A1Q96P44 AC092447.2-201ENST00000435487 669 ntBASIC4.68□□□□□ -1.66
COL21A1Q96P44 AL354714.3-201ENST00000447284 493 ntBASIC4.68□□□□□ -1.66
COL21A1Q96P44 NDUFA5P8-201ENST00000449019 346 ntBASIC4.68□□□□□ -1.66
COL21A1Q96P44 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COL21A1Q96P44 AL445433.1-201ENST00000457507 257 ntBASIC4.68□□□□□ -1.66
COL21A1Q96P44 AC090114.3-201ENST00000479267 829 ntBASIC4.68□□□□□ -1.66
COL21A1Q96P44 HMGN2P25-201ENST00000486956 268 ntBASIC4.68□□□□□ -1.66
COL21A1Q96P44 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.68□□□□□ -1.66
COL21A1Q96P44 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.68□□□□□ -1.66
COL21A1Q96P44 RNA5SP464-201ENST00000516251 108 ntBASIC4.68□□□□□ -1.66
COL21A1Q96P44 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.68□□□□□ -1.66
COL21A1Q96P44 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.68□□□□□ -1.66
COL21A1Q96P44 HMGN2P6-201ENST00000551091 273 ntBASIC4.68□□□□□ -1.66
COL21A1Q96P44 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.68□□□□□ -1.66
COL21A1Q96P44 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC4.68□□□□□ -1.66
COL21A1Q96P44 AC116553.2-201ENST00000564203 463 ntBASIC4.68□□□□□ -1.66
COL21A1Q96P44 AC016180.1-201ENST00000567945 403 ntBASIC4.68□□□□□ -1.66
COL21A1Q96P44 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.68□□□□□ -1.66
COL21A1Q96P44 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.68□□□□□ -1.66
COL21A1Q96P44 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL21A1Q96P44 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.68□□□□□ -1.66
COL21A1Q96P44 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL21A1Q96P44 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL21A1Q96P44 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.68□□□□□ -1.66
COL21A1Q96P44 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
COL21A1Q96P44 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
COL21A1Q96P44 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.68□□□□□ -1.66
COL21A1Q96P44 AC109780.1-201ENST00000451768 1344 ntBASIC4.68□□□□□ -1.66
COL21A1Q96P44 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.68□□□□□ -1.66
COL21A1Q96P44 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.68□□□□□ -1.66
COL21A1Q96P44 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL21A1Q96P44 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.67□□□□□ -1.66
COL21A1Q96P44 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL21A1Q96P44 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COL21A1Q96P44 AC068446.1-201ENST00000556425 1549 ntBASIC4.67□□□□□ -1.66
COL21A1Q96P44 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.67□□□□□ -1.66
COL21A1Q96P44 SCN1A-220ENST00000641603 12506 ntBASIC4.67□□□□□ -1.66
COL21A1Q96P44 AC107068.1-201ENST00000563286 4218 ntBASIC4.67□□□□□ -1.66
COL21A1Q96P44 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.67□□□□□ -1.66
COL21A1Q96P44 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COL21A1Q96P44 SNORA66-201ENST00000384792 133 ntBASIC4.67□□□□□ -1.66
COL21A1Q96P44 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.67□□□□□ -1.66
COL21A1Q96P44 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.67□□□□□ -1.66
COL21A1Q96P44 RN7SKP278-201ENST00000410504 342 ntBASIC4.67□□□□□ -1.66
COL21A1Q96P44 DPPA2P3-201ENST00000411853 655 ntBASIC4.67□□□□□ -1.66
COL21A1Q96P44 RPL23AP27-201ENST00000415161 451 ntBASIC4.67□□□□□ -1.66
COL21A1Q96P44 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.67□□□□□ -1.66
COL21A1Q96P44 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.67□□□□□ -1.66
COL21A1Q96P44 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COL21A1Q96P44 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.67□□□□□ -1.66
COL21A1Q96P44 AC073850.1-201ENST00000449243 255 ntBASIC4.67□□□□□ -1.66
COL21A1Q96P44 AL691482.1-201ENST00000453255 87 ntBASIC4.67□□□□□ -1.66
COL21A1Q96P44 BX284632.1-201ENST00000478218 541 ntBASIC4.67□□□□□ -1.66
COL21A1Q96P44 RN7SL244P-201ENST00000493405 297 ntBASIC4.67□□□□□ -1.66
COL21A1Q96P44 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.67□□□□□ -1.66
COL21A1Q96P44 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.67□□□□□ -1.66
COL21A1Q96P44 AC010350.1-201ENST00000504908 231 ntBASIC4.67□□□□□ -1.66
COL21A1Q96P44 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.67□□□□□ -1.66
COL21A1Q96P44 AC004980.4-201ENST00000513375 203 ntBASIC4.67□□□□□ -1.66
COL21A1Q96P44 ENPP7P9-201ENST00000514456 627 ntBASIC4.67□□□□□ -1.66
COL21A1Q96P44 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.67□□□□□ -1.66
COL21A1Q96P44 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.67□□□□□ -1.66
COL21A1Q96P44 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.67□□□□□ -1.66
COL21A1Q96P44 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.67□□□□□ -1.66
COL21A1Q96P44 SNORD91B-202ENST00000608459 222 ntBASIC4.67□□□□□ -1.66
COL21A1Q96P44 AC097505.1-201ENST00000610199 565 ntBASIC4.67□□□□□ -1.66
COL21A1Q96P44 CDC27P2-201ENST00000425026 1922 ntBASIC4.67□□□□□ -1.66
COL21A1Q96P44 HSPA8P18-201ENST00000439846 1928 ntBASIC4.67□□□□□ -1.66
COL21A1Q96P44 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL21A1Q96P44 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.67□□□□□ -1.66
COL21A1Q96P44 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
COL21A1Q96P44 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.66□□□□□ -1.66
COL21A1Q96P44 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
COL21A1Q96P44 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.66□□□□□ -1.66
COL21A1Q96P44 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COL21A1Q96P44 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL21A1Q96P44 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
COL21A1Q96P44 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.66□□□□□ -1.66
COL21A1Q96P44 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.66□□□□□ -1.66
COL21A1Q96P44 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.66□□□□□ -1.66
COL21A1Q96P44 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.66□□□□□ -1.66
COL21A1Q96P44 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL21A1Q96P44 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.66□□□□□ -1.66
COL21A1Q96P44 RNA5SP305-201ENST00000362665 119 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms