Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 CCDC58P3-201ENST00000590792 430 ntBASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 PCNAP1-202ENST00000595299 752 ntBASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 AC025175.1-201ENST00000606482 759 ntBASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 RPL23AP61-201ENST00000623642 466 ntBASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 FRG1EP-201ENST00000634469 770 ntBASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 AC091305.2-201ENST00000624049 1576 ntBASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 AL132640.2-201ENST00000559968 1698 ntBASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ATG4AQ8WYN0 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 RN7SKP187-201ENST00000365536 330 ntBASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 ADAM5-202ENST00000399789 1942 ntBASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 YES1P1-201ENST00000418510 1628 ntBASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 AC005189.1-201ENST00000431286 310 ntBASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 RPS6P15-201ENST00000431996 751 ntBASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 NDUFA5P10-201ENST00000432147 357 ntBASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 Z99714.1-201ENST00000450463 807 ntBASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 ZNF886P-201ENST00000450781 723 ntBASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 AC090602.1-201ENST00000469695 252 ntBASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 RPS12P31-201ENST00000491419 398 ntBASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 AC106872.5-201ENST00000508856 1416 ntBASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 IMPA1P1-201ENST00000510718 842 ntBASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 CIR1P2-201ENST00000514821 1342 ntBASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 MTND4P8-201ENST00000514997 1362 ntBASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 RN7SKP141-201ENST00000516167 338 ntBASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 RNA5SP271-201ENST00000516700 88 ntBASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 AC024405.1-201ENST00000532521 1042 ntBASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 MTCYBP27-201ENST00000555160 670 ntBASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 MIR4789-201ENST00000577469 82 ntBASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 AC125494.2-201ENST00000602431 657 ntBASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 LINC02019-201ENST00000608605 2060 ntBASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 MIR7109-201ENST00000613748 65 ntBASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 AL118522.2-201ENST00000616045 615 ntBASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 MIR6071-201ENST00000616741 78 ntBASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
ATG4AQ8WYN0 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.6□□□□□ -1.51
ATG4AQ8WYN0 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 193 ms