Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 MTND4LP25-201ENST00000570218 163 ntBASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 AL671309.1-201ENST00000603750 544 ntBASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 SUGT1P3-202ENST00000604259 383 ntBASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 AC242628.1-201ENST00000606810 391 ntBASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 AC079395.2-201ENST00000610982 737 ntBASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 AC009704.2-201ENST00000618739 483 ntBASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 AC073869.8-201ENST00000641806 335 ntBASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 AC104964.3-201ENST00000606115 2860 ntBASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 DDX18P4-201ENST00000511690 1966 ntBASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 AC009501.3-201ENST00000605001 1352 ntBASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 RNA5SP234-201ENST00000363916 119 ntBASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 MIR92A2-201ENST00000385299 75 ntBASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 AC009804.1-201ENST00000400949 179 ntBASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 Z86062.1-201ENST00000406773 777 ntBASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 DPY19L1P2-201ENST00000426647 915 ntBASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 AC023141.6-201ENST00000429418 337 ntBASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 MTND2P30-201ENST00000456663 382 ntBASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 CABYRP1-201ENST00000465493 1045 ntBASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 RN7SL547P-201ENST00000490793 290 ntBASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 EIF3LP3-201ENST00000495197 822 ntBASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 RPS24P16-201ENST00000497294 392 ntBASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 AC008628.1-201ENST00000508663 265 ntBASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 AC025768.1-201ENST00000510057 267 ntBASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 PDCD5P1-201ENST00000543528 309 ntBASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 AL136520.1-202ENST00000555494 763 ntBASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 SETP1-201ENST00000556014 845 ntBASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 AP005262.1-201ENST00000582646 997 ntBASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 AC000068.2-201ENST00000608816 460 ntBASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 AC010632.3-201ENST00000611377 369 ntBASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 MIR6862-1-201ENST00000613016 70 ntBASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 MIR6862-2-201ENST00000614755 70 ntBASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 AC007204.2-201ENST00000615022 616 ntBASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 MIR6729-201ENST00000618194 65 ntBASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 AC007342.8-201ENST00000623278 678 ntBASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 AL355480.1-201ENST00000629041 99 ntBASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NUP54Q7Z3B4 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 AC008079.2-201ENST00000623543 20396 ntBASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 AC021242.1-201ENST00000507315 2035 ntBASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.01□□□□□ -1.61
NUP54Q7Z3B4 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 833.6 ms