Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 RNU6-236P-201ENST00000363886 106 ntBASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 RPS3AP37-201ENST00000419176 745 ntBASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 OR5W1P-201ENST00000423705 938 ntBASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 UBE2V1P1-201ENST00000430836 445 ntBASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 USP24P1-201ENST00000433802 779 ntBASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 MTCYBP12-201ENST00000440559 1134 ntBASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 AC015983.1-201ENST00000441577 373 ntBASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 AC004129.2-201ENST00000457229 287 ntBASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 AC023050.1-201ENST00000498198 304 ntBASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 MAL2-205ENST00000521048 575 ntTSL 4 BASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 AC068020.1-201ENST00000594215 661 ntBASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 AC130352.1-201ENST00000602979 661 ntBASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 AC000068.2-201ENST00000608816 460 ntBASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.53□□□□□ -1.36
OTOP1Q7RTM1 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
OTOP1Q7RTM1 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
OTOP1Q7RTM1 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.52□□□□□ -1.36
OTOP1Q7RTM1 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 MFSD8-239ENST00000641590 2479 ntBASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 AL731532.1-201ENST00000623972 4236 ntBASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 GNG5P2-201ENST00000372054 207 ntBASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 RNU6-224P-201ENST00000384055 107 ntBASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 SNORD116-8-201ENST00000384365 95 ntBASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 AC013442.1-201ENST00000397347 228 ntBASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 AL121977.1-201ENST00000401636 979 ntBASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 AC093162.1-201ENST00000419682 124 ntBASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 AC006065.1-201ENST00000422539 802 ntBASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 AC108075.1-201ENST00000424692 529 ntBASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 RPS4XP16-201ENST00000427198 791 ntBASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 AL589880.1-201ENST00000448271 287 ntBASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 AL389915.2-201ENST00000454576 441 ntBASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 RN7SL738P-201ENST00000470264 297 ntBASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 AC010486.2-201ENST00000505572 483 ntBASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 AC008837.1-201ENST00000511513 412 ntBASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 RN7SKP248-201ENST00000516278 305 ntBASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 AL121594.2-201ENST00000541658 472 ntBASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 AC023050.2-201ENST00000544968 387 ntBASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 AC005252.1-201ENST00000604518 1063 ntBASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 AC024060.1-201ENST00000607052 494 ntBASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 AC123767.1-202ENST00000620407 817 ntBASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 AP000346.3-201ENST00000622821 210 ntBASIC6.52□□□□□ -1.37
OTOP1Q7RTM1 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms