Protein–RNA interactions for Protein: Q53GS9

USP39, U4/U6.U5 tri-snRNP-associated protein 2, humanhuman

Known RBP Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP39Q53GS9 AC127526.2-201ENST00000426436 775 ntBASIC5.97□□□□□ -1.45
USP39Q53GS9 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.97□□□□□ -1.45
USP39Q53GS9 AC016027.5-201ENST00000427227 210 ntBASIC5.97□□□□□ -1.45
USP39Q53GS9 AC093422.3-201ENST00000428506 305 ntBASIC5.97□□□□□ -1.45
USP39Q53GS9 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.97□□□□□ -1.45
USP39Q53GS9 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.97□□□□□ -1.45
USP39Q53GS9 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.97□□□□□ -1.45
USP39Q53GS9 MTCO2P16-201ENST00000436962 677 ntBASIC5.97□□□□□ -1.45
USP39Q53GS9 ISCA1P2-201ENST00000438679 421 ntBASIC5.97□□□□□ -1.45
USP39Q53GS9 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.97□□□□□ -1.45
USP39Q53GS9 RPL23AP60-201ENST00000450011 454 ntBASIC5.97□□□□□ -1.45
USP39Q53GS9 RPL12P26-201ENST00000452430 487 ntBASIC5.97□□□□□ -1.45
USP39Q53GS9 AC112187.1-201ENST00000455837 479 ntBASIC5.97□□□□□ -1.45
USP39Q53GS9 AC073594.1-201ENST00000462065 364 ntBASIC5.97□□□□□ -1.45
USP39Q53GS9 AC090114.3-201ENST00000479267 829 ntBASIC5.97□□□□□ -1.45
USP39Q53GS9 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
USP39Q53GS9 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.97□□□□□ -1.45
USP39Q53GS9 AC091544.1-201ENST00000484702 348 ntBASIC5.97□□□□□ -1.45
USP39Q53GS9 AC104685.1-201ENST00000502445 371 ntBASIC5.97□□□□□ -1.45
USP39Q53GS9 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.97□□□□□ -1.45
USP39Q53GS9 RPF2P2-201ENST00000504693 896 ntBASIC5.97□□□□□ -1.45
USP39Q53GS9 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC5.97□□□□□ -1.45
USP39Q53GS9 MTCO1P31-201ENST00000506355 492 ntBASIC5.97□□□□□ -1.45
USP39Q53GS9 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
USP39Q53GS9 SNORA43.3-201ENST00000517240 103 ntBASIC5.97□□□□□ -1.45
USP39Q53GS9 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.97□□□□□ -1.45
USP39Q53GS9 MTCO1P49-201ENST00000523429 802 ntBASIC5.97□□□□□ -1.45
USP39Q53GS9 OR6M2P-201ENST00000529831 871 ntBASIC5.97□□□□□ -1.45
USP39Q53GS9 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.97□□□□□ -1.45
USP39Q53GS9 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.97□□□□□ -1.45
USP39Q53GS9 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
USP39Q53GS9 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.97□□□□□ -1.45
USP39Q53GS9 AC008015.1-201ENST00000555505 465 ntBASIC5.97□□□□□ -1.45
USP39Q53GS9 AL049872.1-201ENST00000556323 322 ntBASIC5.97□□□□□ -1.45
USP39Q53GS9 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC5.97□□□□□ -1.45
USP39Q53GS9 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.97□□□□□ -1.45
USP39Q53GS9 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.97□□□□□ -1.45
USP39Q53GS9 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.97□□□□□ -1.45
USP39Q53GS9 AC005242.1-201ENST00000585658 438 ntBASIC5.97□□□□□ -1.45
USP39Q53GS9 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.97□□□□□ -1.45
USP39Q53GS9 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.97□□□□□ -1.45
USP39Q53GS9 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
USP39Q53GS9 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.97□□□□□ -1.45
USP39Q53GS9 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.97□□□□□ -1.45
USP39Q53GS9 AC013468.1-201ENST00000608680 598 ntBASIC5.97□□□□□ -1.45
USP39Q53GS9 AC109347.2-201ENST00000610220 349 ntBASIC5.97□□□□□ -1.45
USP39Q53GS9 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.97□□□□□ -1.45
USP39Q53GS9 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.97□□□□□ -1.45
USP39Q53GS9 AC073530.2-201ENST00000623987 261 ntBASIC5.97□□□□□ -1.45
USP39Q53GS9 AC019226.1-201ENST00000625666 515 ntBASIC5.97□□□□□ -1.45
USP39Q53GS9 FRG1DP-201ENST00000635586 771 ntBASIC5.97□□□□□ -1.45
USP39Q53GS9 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.97□□□□□ -1.45
USP39Q53GS9 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
USP39Q53GS9 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
USP39Q53GS9 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.97□□□□□ -1.45
USP39Q53GS9 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.97□□□□□ -1.45
USP39Q53GS9 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.97□□□□□ -1.45
USP39Q53GS9 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
USP39Q53GS9 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
USP39Q53GS9 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
USP39Q53GS9 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
USP39Q53GS9 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
USP39Q53GS9 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
USP39Q53GS9 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.45
USP39Q53GS9 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
USP39Q53GS9 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.96□□□□□ -1.45
USP39Q53GS9 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.45
USP39Q53GS9 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
USP39Q53GS9 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.96□□□□□ -1.45
USP39Q53GS9 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
USP39Q53GS9 CDC27P2-201ENST00000425026 1922 ntBASIC5.96□□□□□ -1.46
USP39Q53GS9 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
USP39Q53GS9 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
USP39Q53GS9 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
USP39Q53GS9 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
USP39Q53GS9 SNORA64.1-201ENST00000362600 132 ntBASIC5.96□□□□□ -1.46
USP39Q53GS9 U3.7-201ENST00000363668 216 ntBASIC5.96□□□□□ -1.46
USP39Q53GS9 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.96□□□□□ -1.46
USP39Q53GS9 RNU6-636P-201ENST00000384598 107 ntBASIC5.96□□□□□ -1.46
USP39Q53GS9 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.96□□□□□ -1.46
USP39Q53GS9 RPS26P38-201ENST00000414476 348 ntBASIC5.96□□□□□ -1.46
USP39Q53GS9 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.96□□□□□ -1.46
USP39Q53GS9 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.96□□□□□ -1.46
USP39Q53GS9 AL662874.1-201ENST00000426065 230 ntBASIC5.96□□□□□ -1.46
USP39Q53GS9 RNF19BPX-201ENST00000426224 625 ntBASIC5.96□□□□□ -1.46
USP39Q53GS9 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
USP39Q53GS9 NEK4P1-201ENST00000433383 879 ntBASIC5.96□□□□□ -1.46
USP39Q53GS9 EEF1B2P6-201ENST00000445713 673 ntBASIC5.96□□□□□ -1.46
USP39Q53GS9 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.96□□□□□ -1.46
USP39Q53GS9 AC092754.2-201ENST00000463506 460 ntBASIC5.96□□□□□ -1.46
USP39Q53GS9 MTND3P7-201ENST00000474435 343 ntBASIC5.96□□□□□ -1.46
USP39Q53GS9 CBX1P5-201ENST00000475330 559 ntBASIC5.96□□□□□ -1.46
USP39Q53GS9 RN7SL799P-201ENST00000475891 298 ntBASIC5.96□□□□□ -1.46
USP39Q53GS9 AC011037.1-201ENST00000483964 558 ntBASIC5.96□□□□□ -1.46
USP39Q53GS9 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.96□□□□□ -1.46
USP39Q53GS9 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
USP39Q53GS9 AC091951.3-201ENST00000504093 246 ntBASIC5.96□□□□□ -1.46
USP39Q53GS9 MTND5P13-201ENST00000513046 1079 ntBASIC5.96□□□□□ -1.46
USP39Q53GS9 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.96□□□□□ -1.46
USP39Q53GS9 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms