Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RFX4Q33E94 AC093775.1-201ENST00000624154 1868 ntBASIC4.58□□□□□ -1.68
RFX4Q33E94 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.58□□□□□ -1.68
RFX4Q33E94 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
RFX4Q33E94 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.58□□□□□ -1.68
RFX4Q33E94 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RFX4Q33E94 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
RFX4Q33E94 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
RFX4Q33E94 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
RFX4Q33E94 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.58□□□□□ -1.68
RFX4Q33E94 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
RFX4Q33E94 RNA5SP146-201ENST00000410743 123 ntBASIC4.58□□□□□ -1.68
RFX4Q33E94 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.58□□□□□ -1.68
RFX4Q33E94 AC004448.2-201ENST00000422360 586 ntBASIC4.58□□□□□ -1.68
RFX4Q33E94 RGS17P1-201ENST00000423358 553 ntBASIC4.58□□□□□ -1.68
RFX4Q33E94 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.58□□□□□ -1.68
RFX4Q33E94 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.58□□□□□ -1.68
RFX4Q33E94 PPIAP13-201ENST00000434706 478 ntBASIC4.58□□□□□ -1.68
RFX4Q33E94 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.58□□□□□ -1.68
RFX4Q33E94 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.58□□□□□ -1.68
RFX4Q33E94 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.58□□□□□ -1.68
RFX4Q33E94 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.58□□□□□ -1.68
RFX4Q33E94 RBMY2TP-201ENST00000451162 947 ntBASIC4.58□□□□□ -1.68
RFX4Q33E94 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.58□□□□□ -1.68
RFX4Q33E94 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.58□□□□□ -1.68
RFX4Q33E94 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.58□□□□□ -1.68
RFX4Q33E94 RPL23AP65-201ENST00000475608 468 ntBASIC4.58□□□□□ -1.68
RFX4Q33E94 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RFX4Q33E94 OR2A3P-201ENST00000493774 953 ntBASIC4.58□□□□□ -1.68
RFX4Q33E94 AC104971.1-201ENST00000495117 578 ntBASIC4.58□□□□□ -1.68
RFX4Q33E94 STMN1P2-201ENST00000508435 439 ntBASIC4.58□□□□□ -1.68
RFX4Q33E94 UGT2A3P7-201ENST00000510485 734 ntBASIC4.58□□□□□ -1.68
RFX4Q33E94 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.58□□□□□ -1.68
RFX4Q33E94 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.58□□□□□ -1.68
RFX4Q33E94 AC134349.2-201ENST00000535136 910 ntBASIC4.58□□□□□ -1.68
RFX4Q33E94 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.58□□□□□ -1.68
RFX4Q33E94 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.58□□□□□ -1.68
RFX4Q33E94 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
RFX4Q33E94 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RFX4Q33E94 AC020978.7-201ENST00000575953 1187 ntBASIC4.58□□□□□ -1.68
RFX4Q33E94 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.58□□□□□ -1.68
RFX4Q33E94 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.58□□□□□ -1.68
RFX4Q33E94 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.58□□□□□ -1.68
RFX4Q33E94 AL589674.2-201ENST00000604304 337 ntBASIC4.58□□□□□ -1.68
RFX4Q33E94 AC087468.1-201ENST00000604365 630 ntBASIC4.58□□□□□ -1.68
RFX4Q33E94 AL353600.1-201ENST00000608148 251 ntBASIC4.58□□□□□ -1.68
RFX4Q33E94 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.58□□□□□ -1.68
RFX4Q33E94 RPSAP73-201ENST00000614820 330 ntBASIC4.58□□□□□ -1.68
RFX4Q33E94 AC007204.2-201ENST00000615022 616 ntBASIC4.58□□□□□ -1.68
RFX4Q33E94 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RFX4Q33E94 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
RFX4Q33E94 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.58□□□□□ -1.68
RFX4Q33E94 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
RFX4Q33E94 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RFX4Q33E94 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
RFX4Q33E94 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.57□□□□□ -1.68
RFX4Q33E94 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
RFX4Q33E94 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
RFX4Q33E94 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
RFX4Q33E94 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
RFX4Q33E94 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RFX4Q33E94 RN7SKP104-201ENST00000362605 328 ntBASIC4.57□□□□□ -1.68
RFX4Q33E94 AL353625.1-202ENST00000366273 571 ntBASIC4.57□□□□□ -1.68
RFX4Q33E94 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RFX4Q33E94 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.57□□□□□ -1.68
RFX4Q33E94 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.57□□□□□ -1.68
RFX4Q33E94 AC004938.1-201ENST00000438468 308 ntBASIC4.57□□□□□ -1.68
RFX4Q33E94 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.57□□□□□ -1.68
RFX4Q33E94 AC073587.1-201ENST00000447093 876 ntBASIC4.57□□□□□ -1.68
RFX4Q33E94 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.57□□□□□ -1.68
RFX4Q33E94 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.57□□□□□ -1.68
RFX4Q33E94 AC023141.9-201ENST00000458734 412 ntBASIC4.57□□□□□ -1.68
RFX4Q33E94 RN7SL817P-201ENST00000480777 288 ntBASIC4.57□□□□□ -1.68
RFX4Q33E94 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.57□□□□□ -1.68
RFX4Q33E94 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.57□□□□□ -1.68
RFX4Q33E94 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.57□□□□□ -1.68
RFX4Q33E94 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.57□□□□□ -1.68
RFX4Q33E94 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.57□□□□□ -1.68
RFX4Q33E94 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.57□□□□□ -1.68
RFX4Q33E94 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RFX4Q33E94 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RFX4Q33E94 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.57□□□□□ -1.68
RFX4Q33E94 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.57□□□□□ -1.68
RFX4Q33E94 AC124856.1-201ENST00000600819 896 ntBASIC4.57□□□□□ -1.68
RFX4Q33E94 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.57□□□□□ -1.68
RFX4Q33E94 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.57□□□□□ -1.68
RFX4Q33E94 AC004477.3-201ENST00000614061 590 ntBASIC4.57□□□□□ -1.68
RFX4Q33E94 AC090527.3-201ENST00000619041 548 ntBASIC4.57□□□□□ -1.68
RFX4Q33E94 AF117829.2-201ENST00000619538 361 ntBASIC4.57□□□□□ -1.68
RFX4Q33E94 AC026124.2-201ENST00000621847 656 ntBASIC4.57□□□□□ -1.68
RFX4Q33E94 AP001005.3-201ENST00000622049 129 ntBASIC4.57□□□□□ -1.68
RFX4Q33E94 AP003400.2-201ENST00000624036 666 ntBASIC4.57□□□□□ -1.68
RFX4Q33E94 AC006453.5-201ENST00000636451 619 ntBASIC4.57□□□□□ -1.68
RFX4Q33E94 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.57□□□□□ -1.68
RFX4Q33E94 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RFX4Q33E94 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RFX4Q33E94 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
RFX4Q33E94 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
RFX4Q33E94 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.57□□□□□ -1.68
RFX4Q33E94 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms