Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC3.72□□□□□ -1.81
CCL20P78556 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC3.72□□□□□ -1.81
CCL20P78556 AC090151.1-201ENST00000520784 730 ntBASIC3.72□□□□□ -1.81
CCL20P78556 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC3.72□□□□□ -1.81
CCL20P78556 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC3.72□□□□□ -1.81
CCL20P78556 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC3.72□□□□□ -1.81
CCL20P78556 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC3.72□□□□□ -1.81
CCL20P78556 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC3.72□□□□□ -1.81
CCL20P78556 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CCL20P78556 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC3.72□□□□□ -1.81
CCL20P78556 AC008759.1-201ENST00000589783 983 ntBASIC3.72□□□□□ -1.81
CCL20P78556 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC3.72□□□□□ -1.81
CCL20P78556 AF117829.2-201ENST00000619538 361 ntBASIC3.72□□□□□ -1.81
CCL20P78556 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC3.72□□□□□ -1.81
CCL20P78556 AC019206.1-201ENST00000621938 425 ntBASIC3.72□□□□□ -1.81
CCL20P78556 AP001005.3-201ENST00000622049 129 ntBASIC3.72□□□□□ -1.81
CCL20P78556 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC3.72□□□□□ -1.81
CCL20P78556 METTL15-211ENST00000634762 718 ntTSL 5 BASIC3.72□□□□□ -1.81
CCL20P78556 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.72□□□□□ -1.81
CCL20P78556 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
CCL20P78556 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
CCL20P78556 AL121950.1-201ENST00000624993 2077 ntBASIC3.72□□□□□ -1.81
CCL20P78556 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CCL20P78556 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
CCL20P78556 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCL20P78556 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC3.72□□□□□ -1.81
CCL20P78556 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCL20P78556 MAPK10-304ENST00000641341 3984 ntBASIC3.71□□□□□ -1.81
CCL20P78556 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
CCL20P78556 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCL20P78556 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC3.71□□□□□ -1.82
CCL20P78556 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
CCL20P78556 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCL20P78556 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCL20P78556 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCL20P78556 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCL20P78556 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
CCL20P78556 RNU6-729P-201ENST00000384399 107 ntBASIC3.71□□□□□ -1.82
CCL20P78556 AL645733.1-201ENST00000402250 217 ntBASIC3.71□□□□□ -1.82
CCL20P78556 AL021331.1-201ENST00000402817 582 ntBASIC3.71□□□□□ -1.82
CCL20P78556 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC3.71□□□□□ -1.82
CCL20P78556 RNA5SP345-201ENST00000410646 108 ntBASIC3.71□□□□□ -1.82
CCL20P78556 TBCAP2-201ENST00000416175 326 ntBASIC3.71□□□□□ -1.82
CCL20P78556 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC3.71□□□□□ -1.82
CCL20P78556 AC013470.3-201ENST00000420252 1194 ntBASIC3.71□□□□□ -1.82
CCL20P78556 AC066692.1-201ENST00000421721 457 ntBASIC3.71□□□□□ -1.82
CCL20P78556 AC108075.1-201ENST00000424692 529 ntBASIC3.71□□□□□ -1.82
CCL20P78556 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC3.71□□□□□ -1.82
CCL20P78556 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC3.71□□□□□ -1.82
CCL20P78556 AL354893.1-201ENST00000433735 348 ntBASIC3.71□□□□□ -1.82
CCL20P78556 HLA-N-201ENST00000437516 135 ntBASIC3.71□□□□□ -1.82
CCL20P78556 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC3.71□□□□□ -1.82
CCL20P78556 AL354714.3-201ENST00000447284 493 ntBASIC3.71□□□□□ -1.82
CCL20P78556 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC3.71□□□□□ -1.82
CCL20P78556 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC3.71□□□□□ -1.82
CCL20P78556 AC107015.1-201ENST00000466902 747 ntBASIC3.71□□□□□ -1.82
CCL20P78556 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCL20P78556 RN7SL214P-201ENST00000487317 265 ntBASIC3.71□□□□□ -1.82
CCL20P78556 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC3.71□□□□□ -1.82
CCL20P78556 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC3.71□□□□□ -1.82
CCL20P78556 RN7SKP34-201ENST00000516142 244 ntBASIC3.71□□□□□ -1.82
CCL20P78556 RNU6-943P-201ENST00000516960 98 ntBASIC3.71□□□□□ -1.82
CCL20P78556 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC3.71□□□□□ -1.82
CCL20P78556 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC3.71□□□□□ -1.82
CCL20P78556 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC3.71□□□□□ -1.82
CCL20P78556 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC3.71□□□□□ -1.82
CCL20P78556 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCL20P78556 AL049839.1-201ENST00000556151 657 ntBASIC3.71□□□□□ -1.82
CCL20P78556 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC3.71□□□□□ -1.82
CCL20P78556 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC3.71□□□□□ -1.82
CCL20P78556 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC3.71□□□□□ -1.82
CCL20P78556 AC084759.1-201ENST00000561168 290 ntBASIC3.71□□□□□ -1.82
CCL20P78556 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC3.71□□□□□ -1.82
CCL20P78556 MIR3154-201ENST00000577829 84 ntBASIC3.71□□□□□ -1.82
CCL20P78556 EIF1P5-201ENST00000585002 234 ntBASIC3.71□□□□□ -1.82
CCL20P78556 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC3.71□□□□□ -1.82
CCL20P78556 AL133406.3-201ENST00000606817 541 ntBASIC3.71□□□□□ -1.82
CCL20P78556 LINC00901.1-201ENST00000617252 152 ntBASIC3.71□□□□□ -1.82
CCL20P78556 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC3.71□□□□□ -1.82
CCL20P78556 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC3.71□□□□□ -1.82
CCL20P78556 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC3.71□□□□□ -1.82
CCL20P78556 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCL20P78556 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC3.71□□□□□ -1.82
CCL20P78556 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCL20P78556 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.71□□□□□ -1.82
CCL20P78556 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCL20P78556 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.7□□□□□ -1.82
CCL20P78556 AC018529.3-201ENST00000624212 2254 ntBASIC3.7□□□□□ -1.82
CCL20P78556 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC3.7□□□□□ -1.82
CCL20P78556 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.7□□□□□ -1.82
CCL20P78556 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCL20P78556 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC3.7□□□□□ -1.82
CCL20P78556 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCL20P78556 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCL20P78556 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCL20P78556 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCL20P78556 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCL20P78556 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCL20P78556 OR52B3P-201ENST00000314715 928 ntBASIC3.7□□□□□ -1.82
CCL20P78556 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms