Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
NKX6-1P78426 AL355488.2-201ENST00000609909 2850 ntBASIC5.45□□□□□ -1.54
NKX6-1P78426 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NKX6-1P78426 TMSB4XP4-201ENST00000323496 618 ntBASIC5.45□□□□□ -1.54
NKX6-1P78426 FAM32BP-201ENST00000344033 333 ntBASIC5.45□□□□□ -1.54
NKX6-1P78426 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.45□□□□□ -1.54
NKX6-1P78426 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
NKX6-1P78426 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NKX6-1P78426 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.45□□□□□ -1.54
NKX6-1P78426 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
NKX6-1P78426 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.45□□□□□ -1.54
NKX6-1P78426 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.45□□□□□ -1.54
NKX6-1P78426 MTND4P20-201ENST00000424125 869 ntBASIC5.45□□□□□ -1.54
NKX6-1P78426 DPRXP1-201ENST00000426312 460 ntBASIC5.45□□□□□ -1.54
NKX6-1P78426 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.45□□□□□ -1.54
NKX6-1P78426 FTLP19-201ENST00000433300 394 ntBASIC5.45□□□□□ -1.54
NKX6-1P78426 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
NKX6-1P78426 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.45□□□□□ -1.54
NKX6-1P78426 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.45□□□□□ -1.54
NKX6-1P78426 AC079776.3-201ENST00000450665 370 ntBASIC5.45□□□□□ -1.54
NKX6-1P78426 SEPT7P3-201ENST00000455017 621 ntBASIC5.45□□□□□ -1.54
NKX6-1P78426 AL133477.1-201ENST00000457472 514 ntBASIC5.45□□□□□ -1.54
NKX6-1P78426 SNX18P26-201ENST00000458433 740 ntBASIC5.45□□□□□ -1.54
NKX6-1P78426 AC007998.1-201ENST00000474156 672 ntBASIC5.45□□□□□ -1.54
NKX6-1P78426 RN7SL326P-201ENST00000477493 296 ntBASIC5.45□□□□□ -1.54
NKX6-1P78426 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.45□□□□□ -1.54
NKX6-1P78426 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.45□□□□□ -1.54
NKX6-1P78426 AC026782.2-201ENST00000510845 636 ntBASIC5.45□□□□□ -1.54
NKX6-1P78426 RPL7L1P4-201ENST00000513004 707 ntBASIC5.45□□□□□ -1.54
NKX6-1P78426 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.45□□□□□ -1.54
NKX6-1P78426 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC5.45□□□□□ -1.54
NKX6-1P78426 PRMT5P1-201ENST00000514351 598 ntBASIC5.45□□□□□ -1.54
NKX6-1P78426 SNORD46.2-201ENST00000516021 102 ntBASIC5.45□□□□□ -1.54
NKX6-1P78426 RNA5SP271-201ENST00000516700 88 ntBASIC5.45□□□□□ -1.54
NKX6-1P78426 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.45□□□□□ -1.54
NKX6-1P78426 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.45□□□□□ -1.54
NKX6-1P78426 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.45□□□□□ -1.54
NKX6-1P78426 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.45□□□□□ -1.54
NKX6-1P78426 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.45□□□□□ -1.54
NKX6-1P78426 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.45□□□□□ -1.54
NKX6-1P78426 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.45□□□□□ -1.54
NKX6-1P78426 AC069545.1-201ENST00000605671 358 ntBASIC5.45□□□□□ -1.54
NKX6-1P78426 AC018638.7-201ENST00000605836 1114 ntBASIC5.45□□□□□ -1.54
NKX6-1P78426 AC022106.1-201ENST00000612834 766 ntBASIC5.45□□□□□ -1.54
NKX6-1P78426 AL139407.1-201ENST00000613826 1175 ntBASIC5.45□□□□□ -1.54
NKX6-1P78426 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NKX6-1P78426 AC018926.3-201ENST00000618841 406 ntBASIC5.45□□□□□ -1.54
NKX6-1P78426 AC005840.5-201ENST00000619166 599 ntBASIC5.45□□□□□ -1.54
NKX6-1P78426 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.45□□□□□ -1.54
NKX6-1P78426 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
NKX6-1P78426 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
NKX6-1P78426 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.45□□□□□ -1.54
NKX6-1P78426 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
NKX6-1P78426 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NKX6-1P78426 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NKX6-1P78426 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NKX6-1P78426 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NKX6-1P78426 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
NKX6-1P78426 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.45□□□□□ -1.54
NKX6-1P78426 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NKX6-1P78426 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
NKX6-1P78426 AL355852.1-201ENST00000454081 1771 ntBASIC5.44□□□□□ -1.54
NKX6-1P78426 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NKX6-1P78426 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.44□□□□□ -1.54
NKX6-1P78426 MTND5P31-201ENST00000419366 1374 ntBASIC5.44□□□□□ -1.54
NKX6-1P78426 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.44□□□□□ -1.54
NKX6-1P78426 AC011504.1-201ENST00000623331 4103 ntBASIC5.44□□□□□ -1.54
NKX6-1P78426 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NKX6-1P78426 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
NKX6-1P78426 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NKX6-1P78426 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NKX6-1P78426 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NKX6-1P78426 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
NKX6-1P78426 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NKX6-1P78426 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NKX6-1P78426 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
NKX6-1P78426 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NKX6-1P78426 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
NKX6-1P78426 RNA5SP284-201ENST00000384547 118 ntBASIC5.44□□□□□ -1.54
NKX6-1P78426 AC087752.1-201ENST00000391360 558 ntBASIC5.44□□□□□ -1.54
NKX6-1P78426 GSTA8P-201ENST00000404253 637 ntBASIC5.44□□□□□ -1.54
NKX6-1P78426 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.44□□□□□ -1.54
NKX6-1P78426 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.44□□□□□ -1.54
NKX6-1P78426 AC009518.2-201ENST00000418056 731 ntBASIC5.44□□□□□ -1.54
NKX6-1P78426 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.44□□□□□ -1.54
NKX6-1P78426 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.44□□□□□ -1.54
NKX6-1P78426 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.44□□□□□ -1.54
NKX6-1P78426 MRPS21P2-201ENST00000424704 264 ntBASIC5.44□□□□□ -1.54
NKX6-1P78426 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.44□□□□□ -1.54
NKX6-1P78426 MTCO1P54-201ENST00000430139 712 ntBASIC5.44□□□□□ -1.54
NKX6-1P78426 USP9YP31-201ENST00000431405 881 ntBASIC5.44□□□□□ -1.54
NKX6-1P78426 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NKX6-1P78426 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.44□□□□□ -1.54
NKX6-1P78426 PPIAP17-201ENST00000438507 471 ntBASIC5.44□□□□□ -1.54
NKX6-1P78426 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.44□□□□□ -1.54
NKX6-1P78426 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.44□□□□□ -1.54
NKX6-1P78426 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC5.44□□□□□ -1.54
NKX6-1P78426 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.44□□□□□ -1.54
NKX6-1P78426 YWHAQP9-201ENST00000445891 512 ntBASIC5.44□□□□□ -1.54
NKX6-1P78426 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms