Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
ACTBP60709 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ACTBP60709 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ACTBP60709 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
ACTBP60709 RNU6-984P-201ENST00000363236 109 ntBASIC4.33□□□□□ -1.72
ACTBP60709 RNA5SP234-201ENST00000363916 119 ntBASIC4.33□□□□□ -1.72
ACTBP60709 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ACTBP60709 OR13C3-201ENST00000374781 1108 ntBASIC4.33□□□□□ -1.72
ACTBP60709 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.33□□□□□ -1.72
ACTBP60709 AC093719.1-202ENST00000392735 373 ntBASIC4.33□□□□□ -1.72
ACTBP60709 AL391422.1-201ENST00000402155 436 ntBASIC4.33□□□□□ -1.72
ACTBP60709 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.33□□□□□ -1.72
ACTBP60709 AL158073.1-201ENST00000426848 1104 ntBASIC4.33□□□□□ -1.72
ACTBP60709 RPS20P1-201ENST00000434853 354 ntBASIC4.33□□□□□ -1.72
ACTBP60709 RPS29P10-201ENST00000439197 166 ntBASIC4.33□□□□□ -1.72
ACTBP60709 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.33□□□□□ -1.72
ACTBP60709 AC011225.1-201ENST00000457751 369 ntBASIC4.33□□□□□ -1.72
ACTBP60709 CCDC75P1-201ENST00000469247 791 ntBASIC4.33□□□□□ -1.72
ACTBP60709 RPL35AP19-201ENST00000469425 329 ntBASIC4.33□□□□□ -1.72
ACTBP60709 EIF1P7-201ENST00000487533 337 ntBASIC4.33□□□□□ -1.72
ACTBP60709 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.33□□□□□ -1.72
ACTBP60709 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.33□□□□□ -1.72
ACTBP60709 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.33□□□□□ -1.72
ACTBP60709 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.33□□□□□ -1.72
ACTBP60709 RNA5SP464-201ENST00000516251 108 ntBASIC4.33□□□□□ -1.72
ACTBP60709 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.33□□□□□ -1.72
ACTBP60709 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.33□□□□□ -1.72
ACTBP60709 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.33□□□□□ -1.72
ACTBP60709 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.33□□□□□ -1.72
ACTBP60709 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.33□□□□□ -1.72
ACTBP60709 AC125612.1-201ENST00000547580 377 ntBASIC4.33□□□□□ -1.72
ACTBP60709 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.33□□□□□ -1.72
ACTBP60709 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.33□□□□□ -1.72
ACTBP60709 HMGB3P26-201ENST00000560051 582 ntBASIC4.33□□□□□ -1.72
ACTBP60709 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
ACTBP60709 AL589674.2-201ENST00000604304 337 ntBASIC4.33□□□□□ -1.72
ACTBP60709 AC000068.2-201ENST00000608816 460 ntBASIC4.33□□□□□ -1.72
ACTBP60709 AC096586.2-201ENST00000610260 441 ntBASIC4.33□□□□□ -1.72
ACTBP60709 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
ACTBP60709 AL023881.1-201ENST00000621088 301 ntBASIC4.33□□□□□ -1.72
ACTBP60709 AL512356.3-201ENST00000623005 461 ntBASIC4.33□□□□□ -1.72
ACTBP60709 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
ACTBP60709 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
ACTBP60709 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
ACTBP60709 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ACTBP60709 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ACTBP60709 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ACTBP60709 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
ACTBP60709 DDX18P4-201ENST00000511690 1966 ntBASIC4.33□□□□□ -1.72
ACTBP60709 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ACTBP60709 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.32□□□□□ -1.72
ACTBP60709 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.32□□□□□ -1.72
ACTBP60709 AC092747.4-201ENST00000620519 1861 ntBASIC4.32□□□□□ -1.72
ACTBP60709 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ACTBP60709 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.32□□□□□ -1.72
ACTBP60709 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.32□□□□□ -1.72
ACTBP60709 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ACTBP60709 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
ACTBP60709 AC068446.1-201ENST00000556425 1549 ntBASIC4.32□□□□□ -1.72
ACTBP60709 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
ACTBP60709 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
ACTBP60709 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
ACTBP60709 DDX18P5-201ENST00000534547 1306 ntBASIC4.32□□□□□ -1.72
ACTBP60709 RN7SKP113-201ENST00000363891 295 ntBASIC4.32□□□□□ -1.72
ACTBP60709 RNA5SP242-201ENST00000364171 118 ntBASIC4.32□□□□□ -1.72
ACTBP60709 RNA5SP90-201ENST00000364801 99 ntBASIC4.32□□□□□ -1.72
ACTBP60709 RN7SKP269-201ENST00000365545 319 ntBASIC4.32□□□□□ -1.72
ACTBP60709 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.32□□□□□ -1.72
ACTBP60709 MIR323B-201ENST00000385269 82 ntBASIC4.32□□□□□ -1.72
ACTBP60709 AL133388.1-201ENST00000404509 287 ntBASIC4.32□□□□□ -1.72
ACTBP60709 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.32□□□□□ -1.72
ACTBP60709 AL513325.1-201ENST00000417716 1034 ntBASIC4.32□□□□□ -1.72
ACTBP60709 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.32□□□□□ -1.72
ACTBP60709 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.32□□□□□ -1.72
ACTBP60709 GAPDHP49-201ENST00000421421 961 ntBASIC4.32□□□□□ -1.72
ACTBP60709 RPS12P5-201ENST00000423449 371 ntBASIC4.32□□□□□ -1.72
ACTBP60709 IPMKP1-201ENST00000425988 855 ntBASIC4.32□□□□□ -1.72
ACTBP60709 RHEBP2-201ENST00000450289 600 ntBASIC4.32□□□□□ -1.72
ACTBP60709 OTX2P1-201ENST00000450956 354 ntBASIC4.32□□□□□ -1.72
ACTBP60709 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.32□□□□□ -1.72
ACTBP60709 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.32□□□□□ -1.72
ACTBP60709 AC023141.9-201ENST00000458734 412 ntBASIC4.32□□□□□ -1.72
ACTBP60709 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.32□□□□□ -1.72
ACTBP60709 AC022795.1-201ENST00000473808 480 ntBASIC4.32□□□□□ -1.72
ACTBP60709 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.32□□□□□ -1.72
ACTBP60709 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
ACTBP60709 ARL4AP1-201ENST00000503220 705 ntBASIC4.32□□□□□ -1.72
ACTBP60709 AC012400.1-201ENST00000518452 381 ntBASIC4.32□□□□□ -1.72
ACTBP60709 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.32□□□□□ -1.72
ACTBP60709 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.32□□□□□ -1.72
ACTBP60709 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.32□□□□□ -1.72
ACTBP60709 AC005868.1-201ENST00000536421 331 ntBASIC4.32□□□□□ -1.72
ACTBP60709 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.32□□□□□ -1.72
ACTBP60709 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
ACTBP60709 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ACTBP60709 BLZF2P-201ENST00000553776 1130 ntBASIC4.32□□□□□ -1.72
ACTBP60709 AC068446.3-201ENST00000555285 382 ntBASIC4.32□□□□□ -1.72
ACTBP60709 AC105036.1-201ENST00000566222 271 ntBASIC4.32□□□□□ -1.72
ACTBP60709 AC020978.7-201ENST00000575953 1187 ntBASIC4.32□□□□□ -1.72
ACTBP60709 SNORD95-201ENST00000579879 68 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms