Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HDAC4P56524 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HDAC4P56524 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HDAC4P56524 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
HDAC4P56524 HMGB3P7-201ENST00000400214 611 ntBASIC5.56□□□□□ -1.52
HDAC4P56524 MIR1178-201ENST00000408396 91 ntBASIC5.56□□□□□ -1.52
HDAC4P56524 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.56□□□□□ -1.52
HDAC4P56524 RNA5SP487-201ENST00000410186 122 ntBASIC5.56□□□□□ -1.52
HDAC4P56524 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.56□□□□□ -1.52
HDAC4P56524 RANP4-201ENST00000413361 655 ntBASIC5.56□□□□□ -1.52
HDAC4P56524 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.56□□□□□ -1.52
HDAC4P56524 MORF4L1P7-201ENST00000426038 703 ntBASIC5.56□□□□□ -1.52
HDAC4P56524 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.56□□□□□ -1.52
HDAC4P56524 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.56□□□□□ -1.52
HDAC4P56524 CYCSP6-201ENST00000434498 302 ntBASIC5.56□□□□□ -1.52
HDAC4P56524 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.56□□□□□ -1.52
HDAC4P56524 AL513321.1-201ENST00000441175 761 ntBASIC5.56□□□□□ -1.52
HDAC4P56524 AL158053.1-201ENST00000441503 453 ntBASIC5.56□□□□□ -1.52
HDAC4P56524 AC016772.1-201ENST00000444170 1261 ntBASIC5.56□□□□□ -1.52
HDAC4P56524 AL163193.1-201ENST00000444895 788 ntBASIC5.56□□□□□ -1.52
HDAC4P56524 AC006326.1-201ENST00000445465 787 ntBASIC5.56□□□□□ -1.52
HDAC4P56524 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.56□□□□□ -1.52
HDAC4P56524 AC104634.1-201ENST00000452720 462 ntBASIC5.56□□□□□ -1.52
HDAC4P56524 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.56□□□□□ -1.52
HDAC4P56524 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.56□□□□□ -1.52
HDAC4P56524 RN7SL610P-201ENST00000463845 291 ntBASIC5.56□□□□□ -1.52
HDAC4P56524 AP000797.2-201ENST00000475768 606 ntBASIC5.56□□□□□ -1.52
HDAC4P56524 AC008410.1-201ENST00000483777 339 ntBASIC5.56□□□□□ -1.52
HDAC4P56524 RN7SL423P-201ENST00000486202 304 ntBASIC5.56□□□□□ -1.52
HDAC4P56524 AC069304.1-201ENST00000491593 704 ntBASIC5.56□□□□□ -1.52
HDAC4P56524 RPL15P21-201ENST00000495592 567 ntBASIC5.56□□□□□ -1.52
HDAC4P56524 CAB39P1-201ENST00000502277 460 ntBASIC5.56□□□□□ -1.52
HDAC4P56524 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HDAC4P56524 MTCO1P31-201ENST00000506355 492 ntBASIC5.56□□□□□ -1.52
HDAC4P56524 AC010468.3-201ENST00000508225 458 ntBASIC5.56□□□□□ -1.52
HDAC4P56524 ATP5LP3-201ENST00000514223 304 ntBASIC5.56□□□□□ -1.52
HDAC4P56524 RNA5SP373-201ENST00000517271 95 ntBASIC5.56□□□□□ -1.52
HDAC4P56524 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.56□□□□□ -1.52
HDAC4P56524 AC092709.1-201ENST00000521355 1045 ntBASIC5.56□□□□□ -1.52
HDAC4P56524 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.56□□□□□ -1.52
HDAC4P56524 IGKV2-18-201ENST00000522607 343 ntBASIC5.56□□□□□ -1.52
HDAC4P56524 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.56□□□□□ -1.52
HDAC4P56524 HMGB1P40-201ENST00000525121 540 ntBASIC5.56□□□□□ -1.52
HDAC4P56524 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
HDAC4P56524 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.56□□□□□ -1.52
HDAC4P56524 RPL10P14-201ENST00000565265 298 ntBASIC5.56□□□□□ -1.52
HDAC4P56524 MIR4700-201ENST00000578311 74 ntBASIC5.56□□□□□ -1.52
HDAC4P56524 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HDAC4P56524 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.56□□□□□ -1.52
HDAC4P56524 AL391001.1-201ENST00000602747 715 ntBASIC5.56□□□□□ -1.52
HDAC4P56524 AC079395.2-201ENST00000610982 737 ntBASIC5.56□□□□□ -1.52
HDAC4P56524 AC025016.1-201ENST00000616746 682 ntBASIC5.56□□□□□ -1.52
HDAC4P56524 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.56□□□□□ -1.52
HDAC4P56524 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.56□□□□□ -1.52
HDAC4P56524 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.56□□□□□ -1.52
HDAC4P56524 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.56□□□□□ -1.52
HDAC4P56524 AL592494.2-201ENST00000425455 1548 ntBASIC5.56□□□□□ -1.52
HDAC4P56524 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
HDAC4P56524 AC008079.2-201ENST00000623543 20396 ntBASIC5.56□□□□□ -1.52
HDAC4P56524 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HDAC4P56524 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
HDAC4P56524 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
HDAC4P56524 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HDAC4P56524 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
HDAC4P56524 CASC19-281ENST00000642118 1554 ntBASIC5.55□□□□□ -1.52
HDAC4P56524 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.55□□□□□ -1.52
HDAC4P56524 AL136520.1-201ENST00000600311 1322 ntBASIC5.55□□□□□ -1.52
HDAC4P56524 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HDAC4P56524 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
HDAC4P56524 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.55□□□□□ -1.52
HDAC4P56524 SNORA74A-201ENST00000364089 198 ntBASIC5.55□□□□□ -1.52
HDAC4P56524 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HDAC4P56524 RNA5SP241-201ENST00000391326 114 ntBASIC5.55□□□□□ -1.52
HDAC4P56524 AL034403.1-201ENST00000399414 885 ntBASIC5.55□□□□□ -1.52
HDAC4P56524 AC009804.1-201ENST00000400949 179 ntBASIC5.55□□□□□ -1.52
HDAC4P56524 OR3A2-201ENST00000408891 1076 ntBASIC5.55□□□□□ -1.52
HDAC4P56524 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.55□□□□□ -1.52
HDAC4P56524 MTND2P15-201ENST00000418575 892 ntBASIC5.55□□□□□ -1.52
HDAC4P56524 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC5.55□□□□□ -1.52
HDAC4P56524 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.55□□□□□ -1.52
HDAC4P56524 AL121882.1-201ENST00000422893 417 ntBASIC5.55□□□□□ -1.52
HDAC4P56524 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.55□□□□□ -1.52
HDAC4P56524 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.55□□□□□ -1.52
HDAC4P56524 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.55□□□□□ -1.52
HDAC4P56524 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.55□□□□□ -1.52
HDAC4P56524 AL627224.1-201ENST00000448334 444 ntBASIC5.55□□□□□ -1.52
HDAC4P56524 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.55□□□□□ -1.52
HDAC4P56524 CBX1P5-201ENST00000475330 559 ntBASIC5.55□□□□□ -1.52
HDAC4P56524 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.55□□□□□ -1.52
HDAC4P56524 RN7SL447P-201ENST00000494711 245 ntBASIC5.55□□□□□ -1.52
HDAC4P56524 AC108693.1-201ENST00000496068 432 ntBASIC5.55□□□□□ -1.52
HDAC4P56524 HMGB1P3-201ENST00000502802 616 ntBASIC5.55□□□□□ -1.52
HDAC4P56524 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.55□□□□□ -1.52
HDAC4P56524 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HDAC4P56524 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.55□□□□□ -1.52
HDAC4P56524 IMPA1P1-201ENST00000510718 842 ntBASIC5.55□□□□□ -1.52
HDAC4P56524 RNU6-941P-201ENST00000516346 108 ntBASIC5.55□□□□□ -1.52
HDAC4P56524 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.55□□□□□ -1.52
HDAC4P56524 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.55□□□□□ -1.52
HDAC4P56524 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms