Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.52□□□□□ -1.53
VCPP55072 AC022133.1-201ENST00000490961 571 ntBASIC5.52□□□□□ -1.53
VCPP55072 AC093720.1-201ENST00000505681 714 ntBASIC5.52□□□□□ -1.53
VCPP55072 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.52□□□□□ -1.53
VCPP55072 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.52□□□□□ -1.53
VCPP55072 AC008033.2-201ENST00000542626 177 ntBASIC5.52□□□□□ -1.53
VCPP55072 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
VCPP55072 AC009117.1-201ENST00000563948 554 ntBASIC5.52□□□□□ -1.53
VCPP55072 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.52□□□□□ -1.53
VCPP55072 AC020910.2-201ENST00000603635 610 ntBASIC5.52□□□□□ -1.53
VCPP55072 AL159169.2-201ENST00000610061 1269 ntBASIC5.52□□□□□ -1.53
VCPP55072 AC096586.2-201ENST00000610260 441 ntBASIC5.52□□□□□ -1.53
VCPP55072 AC112694.2-201ENST00000623697 768 ntBASIC5.52□□□□□ -1.53
VCPP55072 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
VCPP55072 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VCPP55072 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.52□□□□□ -1.53
VCPP55072 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VCPP55072 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.52□□□□□ -1.53
VCPP55072 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VCPP55072 ADAM5-202ENST00000399789 1942 ntBASIC5.52□□□□□ -1.53
VCPP55072 TRIM51GP-201ENST00000534741 1350 ntBASIC5.52□□□□□ -1.53
VCPP55072 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.52□□□□□ -1.53
VCPP55072 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.52□□□□□ -1.53
VCPP55072 AC011755.1-201ENST00000623763 2049 ntBASIC5.52□□□□□ -1.53
VCPP55072 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.52□□□□□ -1.53
VCPP55072 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
VCPP55072 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
VCPP55072 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
VCPP55072 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VCPP55072 AC100871.1-201ENST00000507871 1456 ntBASIC5.51□□□□□ -1.53
VCPP55072 CUL4AP1-201ENST00000514750 1863 ntBASIC5.51□□□□□ -1.53
VCPP55072 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
VCPP55072 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VCPP55072 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.51□□□□□ -1.53
VCPP55072 AC022417.1-201ENST00000624768 1303 ntBASIC5.51□□□□□ -1.53
VCPP55072 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
VCPP55072 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VCPP55072 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VCPP55072 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VCPP55072 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
VCPP55072 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
VCPP55072 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
VCPP55072 RN7SKP153-201ENST00000365026 316 ntBASIC5.51□□□□□ -1.53
VCPP55072 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.51□□□□□ -1.53
VCPP55072 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
VCPP55072 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.51□□□□□ -1.53
VCPP55072 AC092570.3-201ENST00000420113 693 ntBASIC5.51□□□□□ -1.53
VCPP55072 RPL18P10-201ENST00000425606 538 ntBASIC5.51□□□□□ -1.53
VCPP55072 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
VCPP55072 RN7SL814P-201ENST00000487715 300 ntBASIC5.51□□□□□ -1.53
VCPP55072 RPS4XP20-201ENST00000505751 772 ntBASIC5.51□□□□□ -1.53
VCPP55072 YWHABP2-201ENST00000540201 713 ntBASIC5.51□□□□□ -1.53
VCPP55072 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.51□□□□□ -1.53
VCPP55072 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.51□□□□□ -1.53
VCPP55072 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.51□□□□□ -1.53
VCPP55072 MIR4284-201ENST00000578924 81 ntBASIC5.51□□□□□ -1.53
VCPP55072 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.51□□□□□ -1.53
VCPP55072 AC006840.1-201ENST00000623069 542 ntBASIC5.51□□□□□ -1.53
VCPP55072 AC138627.1-204ENST00000641894 765 ntBASIC5.51□□□□□ -1.53
VCPP55072 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VCPP55072 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VCPP55072 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VCPP55072 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
VCPP55072 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VCPP55072 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VCPP55072 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.5□□□□□ -1.53
VCPP55072 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.5□□□□□ -1.53
VCPP55072 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.5□□□□□ -1.53
VCPP55072 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VCPP55072 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VCPP55072 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.5□□□□□ -1.53
VCPP55072 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
VCPP55072 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
VCPP55072 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.5□□□□□ -1.53
VCPP55072 AC079741.1-201ENST00000321498 212 ntBASIC5.5□□□□□ -1.53
VCPP55072 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VCPP55072 HSPA8P15-201ENST00000401676 786 ntBASIC5.5□□□□□ -1.53
VCPP55072 RPL21P67-201ENST00000402896 478 ntBASIC5.5□□□□□ -1.53
VCPP55072 RNU2-50P-201ENST00000410494 143 ntBASIC5.5□□□□□ -1.53
VCPP55072 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.5□□□□□ -1.53
VCPP55072 AC009480.2-201ENST00000422916 432 ntBASIC5.5□□□□□ -1.53
VCPP55072 RSL24D1P6-201ENST00000426934 401 ntBASIC5.5□□□□□ -1.53
VCPP55072 CNOT7P1-201ENST00000429006 852 ntBASIC5.5□□□□□ -1.53
VCPP55072 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.5□□□□□ -1.53
VCPP55072 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.5□□□□□ -1.53
VCPP55072 OR6C71P-201ENST00000432580 913 ntBASIC5.5□□□□□ -1.53
VCPP55072 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.5□□□□□ -1.53
VCPP55072 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.5□□□□□ -1.53
VCPP55072 NOP56P2-201ENST00000447491 769 ntBASIC5.5□□□□□ -1.53
VCPP55072 RBMY2TP-201ENST00000451162 947 ntBASIC5.5□□□□□ -1.53
VCPP55072 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.5□□□□□ -1.53
VCPP55072 RPL7P41-201ENST00000485823 957 ntBASIC5.5□□□□□ -1.53
VCPP55072 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.5□□□□□ -1.53
VCPP55072 MYL12BP2-201ENST00000503948 512 ntBASIC5.5□□□□□ -1.53
VCPP55072 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.5□□□□□ -1.53
VCPP55072 AC021006.3-201ENST00000530771 192 ntBASIC5.5□□□□□ -1.53
VCPP55072 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.5□□□□□ -1.53
VCPP55072 AC115989.2-201ENST00000578640 563 ntBASIC5.5□□□□□ -1.53
VCPP55072 BNIP3P33-201ENST00000598912 569 ntBASIC5.5□□□□□ -1.53
VCPP55072 RPL26P30-202ENST00000602923 645 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms