Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NR1H2P55055 RARSP1-201ENST00000542842 1418 ntBASIC5.34□□□□□ -1.55
NR1H2P55055 AC144833.1-201ENST00000567953 4089 ntBASIC5.34□□□□□ -1.55
NR1H2P55055 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
NR1H2P55055 AP000568.1-201ENST00000282964 442 ntBASIC5.34□□□□□ -1.55
NR1H2P55055 TMSB4XP2-201ENST00000335179 210 ntBASIC5.34□□□□□ -1.55
NR1H2P55055 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.34□□□□□ -1.55
NR1H2P55055 RNU105B-201ENST00000364478 208 ntBASIC5.34□□□□□ -1.55
NR1H2P55055 RNA5SP211-201ENST00000365516 117 ntBASIC5.34□□□□□ -1.55
NR1H2P55055 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NR1H2P55055 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.34□□□□□ -1.55
NR1H2P55055 EI24P3-201ENST00000399046 1062 ntBASIC5.34□□□□□ -1.55
NR1H2P55055 AL355615.1-201ENST00000406187 641 ntBASIC5.34□□□□□ -1.55
NR1H2P55055 UBE2V1P9-201ENST00000414760 368 ntBASIC5.34□□□□□ -1.55
NR1H2P55055 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.34□□□□□ -1.55
NR1H2P55055 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.34□□□□□ -1.55
NR1H2P55055 DEFB130D-201ENST00000426866 237 ntBASIC5.34□□□□□ -1.55
NR1H2P55055 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.34□□□□□ -1.55
NR1H2P55055 NDUFB4P8-201ENST00000435351 367 ntBASIC5.34□□□□□ -1.55
NR1H2P55055 TUBB4BP6-201ENST00000437576 479 ntBASIC5.34□□□□□ -1.55
NR1H2P55055 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.34□□□□□ -1.55
NR1H2P55055 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.34□□□□□ -1.55
NR1H2P55055 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.34□□□□□ -1.55
NR1H2P55055 AL591363.1-201ENST00000450091 483 ntBASIC5.34□□□□□ -1.55
NR1H2P55055 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NR1H2P55055 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.34□□□□□ -1.55
NR1H2P55055 TPT1P1-201ENST00000458495 518 ntBASIC5.34□□□□□ -1.55
NR1H2P55055 RPS17P5-201ENST00000498293 408 ntBASIC5.34□□□□□ -1.55
NR1H2P55055 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.34□□□□□ -1.55
NR1H2P55055 AC093801.2-201ENST00000503966 1050 ntBASIC5.34□□□□□ -1.55
NR1H2P55055 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.34□□□□□ -1.55
NR1H2P55055 RNA5SP434-201ENST00000516647 121 ntBASIC5.34□□□□□ -1.55
NR1H2P55055 MIR2117-201ENST00000516780 80 ntBASIC5.34□□□□□ -1.55
NR1H2P55055 HMGB1P1-201ENST00000522557 636 ntBASIC5.34□□□□□ -1.55
NR1H2P55055 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.34□□□□□ -1.55
NR1H2P55055 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
NR1H2P55055 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.34□□□□□ -1.55
NR1H2P55055 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NR1H2P55055 AC079600.1-201ENST00000550326 297 ntBASIC5.34□□□□□ -1.55
NR1H2P55055 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.34□□□□□ -1.55
NR1H2P55055 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.34□□□□□ -1.55
NR1H2P55055 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.34□□□□□ -1.55
NR1H2P55055 AL591167.1-201ENST00000607321 456 ntBASIC5.34□□□□□ -1.55
NR1H2P55055 AF129408.1-201ENST00000608767 431 ntBASIC5.34□□□□□ -1.55
NR1H2P55055 AC104763.3-201ENST00000613765 618 ntBASIC5.34□□□□□ -1.55
NR1H2P55055 AC022960.3-201ENST00000619794 441 ntBASIC5.34□□□□□ -1.55
NR1H2P55055 AC073488.3-201ENST00000631611 778 ntBASIC5.34□□□□□ -1.55
NR1H2P55055 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
NR1H2P55055 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
NR1H2P55055 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
NR1H2P55055 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
NR1H2P55055 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.34□□□□□ -1.55
NR1H2P55055 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.34□□□□□ -1.55
NR1H2P55055 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
NR1H2P55055 SMG1P4-204ENST00000523028 4131 ntBASIC5.34□□□□□ -1.55
NR1H2P55055 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
NR1H2P55055 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
NR1H2P55055 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.34□□□□□ -1.56
NR1H2P55055 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.34□□□□□ -1.56
NR1H2P55055 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
NR1H2P55055 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
NR1H2P55055 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NR1H2P55055 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
NR1H2P55055 AC006206.1-201ENST00000544842 3387 ntBASIC5.33□□□□□ -1.56
NR1H2P55055 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NR1H2P55055 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.33□□□□□ -1.56
NR1H2P55055 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
NR1H2P55055 AC006042.3-201ENST00000454684 1469 ntBASIC5.33□□□□□ -1.56
NR1H2P55055 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
NR1H2P55055 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NR1H2P55055 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.33□□□□□ -1.56
NR1H2P55055 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.33□□□□□ -1.56
NR1H2P55055 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
NR1H2P55055 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NR1H2P55055 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.33□□□□□ -1.56
NR1H2P55055 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
NR1H2P55055 OR52E6-202ENST00000379946 954 ntBASIC5.33□□□□□ -1.56
NR1H2P55055 RNA5SP241-201ENST00000391326 114 ntBASIC5.33□□□□□ -1.56
NR1H2P55055 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NR1H2P55055 AC233289.1-201ENST00000403700 508 ntBASIC5.33□□□□□ -1.56
NR1H2P55055 Z68694.1-201ENST00000413929 841 ntBASIC5.33□□□□□ -1.56
NR1H2P55055 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.33□□□□□ -1.56
NR1H2P55055 RPS15AP30-201ENST00000420976 390 ntBASIC5.33□□□□□ -1.56
NR1H2P55055 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.33□□□□□ -1.56
NR1H2P55055 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.33□□□□□ -1.56
NR1H2P55055 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.33□□□□□ -1.56
NR1H2P55055 LYPLA1P1-201ENST00000434514 622 ntBASIC5.33□□□□□ -1.56
NR1H2P55055 RPL23AP19-201ENST00000436229 369 ntBASIC5.33□□□□□ -1.56
NR1H2P55055 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.33□□□□□ -1.56
NR1H2P55055 FTLP8-201ENST00000446770 267 ntBASIC5.33□□□□□ -1.56
NR1H2P55055 AC073909.1-201ENST00000447112 999 ntBASIC5.33□□□□□ -1.56
NR1H2P55055 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.33□□□□□ -1.56
NR1H2P55055 AC021660.1-201ENST00000465006 554 ntBASIC5.33□□□□□ -1.56
NR1H2P55055 PSAT1P4-201ENST00000466500 526 ntBASIC5.33□□□□□ -1.56
NR1H2P55055 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.33□□□□□ -1.56
NR1H2P55055 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.33□□□□□ -1.56
NR1H2P55055 RNU6-415P-201ENST00000516252 97 ntBASIC5.33□□□□□ -1.56
NR1H2P55055 AC010476.1-201ENST00000519111 851 ntBASIC5.33□□□□□ -1.56
NR1H2P55055 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
NR1H2P55055 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms