Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COPAP53621 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COPAP53621 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COPAP53621 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COPAP53621 FBXL21-201ENST00000297158 1305 ntBASIC5.78□□□□□ -1.48
COPAP53621 AC117409.1-201ENST00000470499 1310 ntBASIC5.78□□□□□ -1.48
COPAP53621 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
COPAP53621 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.78□□□□□ -1.48
COPAP53621 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COPAP53621 RN7SKP185-201ENST00000362813 326 ntBASIC5.78□□□□□ -1.48
COPAP53621 AL136131.1-201ENST00000406079 803 ntBASIC5.78□□□□□ -1.48
COPAP53621 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
COPAP53621 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.78□□□□□ -1.48
COPAP53621 AC115285.1-201ENST00000424879 736 ntBASIC5.78□□□□□ -1.48
COPAP53621 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.78□□□□□ -1.48
COPAP53621 RPL23AP4-201ENST00000427757 463 ntBASIC5.78□□□□□ -1.48
COPAP53621 AC005189.1-201ENST00000431286 310 ntBASIC5.78□□□□□ -1.48
COPAP53621 CFL1P1-202ENST00000432948 411 ntBASIC5.78□□□□□ -1.48
COPAP53621 RPS7P2-201ENST00000435134 607 ntBASIC5.78□□□□□ -1.48
COPAP53621 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.78□□□□□ -1.48
COPAP53621 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.78□□□□□ -1.48
COPAP53621 RRM2P4-201ENST00000441721 562 ntBASIC5.78□□□□□ -1.48
COPAP53621 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC5.78□□□□□ -1.48
COPAP53621 AL450996.1-201ENST00000445574 1202 ntBASIC5.78□□□□□ -1.48
COPAP53621 AC023271.1-201ENST00000445936 1090 ntBASIC5.78□□□□□ -1.48
COPAP53621 AC004129.2-201ENST00000457229 287 ntBASIC5.78□□□□□ -1.48
COPAP53621 RN7SL197P-201ENST00000466981 299 ntBASIC5.78□□□□□ -1.48
COPAP53621 COPS8P2-201ENST00000473228 627 ntBASIC5.78□□□□□ -1.48
COPAP53621 UBA52P7-201ENST00000486088 380 ntBASIC5.78□□□□□ -1.48
COPAP53621 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.78□□□□□ -1.48
COPAP53621 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.78□□□□□ -1.48
COPAP53621 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.78□□□□□ -1.48
COPAP53621 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.78□□□□□ -1.48
COPAP53621 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.78□□□□□ -1.48
COPAP53621 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.78□□□□□ -1.48
COPAP53621 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.78□□□□□ -1.48
COPAP53621 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.78□□□□□ -1.48
COPAP53621 AP002373.2-201ENST00000541631 1060 ntBASIC5.78□□□□□ -1.48
COPAP53621 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.78□□□□□ -1.48
COPAP53621 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.78□□□□□ -1.48
COPAP53621 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.78□□□□□ -1.48
COPAP53621 MIR4509-3-201ENST00000578671 94 ntBASIC5.78□□□□□ -1.48
COPAP53621 MIR4509-2-201ENST00000583920 94 ntBASIC5.78□□□□□ -1.48
COPAP53621 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.78□□□□□ -1.48
COPAP53621 AL513327.3-201ENST00000602618 469 ntBASIC5.78□□□□□ -1.48
COPAP53621 IMMP1LP3-201ENST00000604197 224 ntBASIC5.78□□□□□ -1.48
COPAP53621 AC099785.1-201ENST00000605697 437 ntBASIC5.78□□□□□ -1.48
COPAP53621 AL022394.1-201ENST00000606979 292 ntBASIC5.78□□□□□ -1.48
COPAP53621 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.78□□□□□ -1.48
COPAP53621 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.78□□□□□ -1.48
COPAP53621 MIR4509-1-201ENST00000618224 94 ntBASIC5.78□□□□□ -1.48
COPAP53621 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.78□□□□□ -1.48
COPAP53621 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
COPAP53621 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
COPAP53621 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
COPAP53621 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COPAP53621 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COPAP53621 UGT2B26P-201ENST00000508672 1613 ntBASIC5.77□□□□□ -1.48
COPAP53621 AC235565.1-201ENST00000456962 1325 ntBASIC5.77□□□□□ -1.49
COPAP53621 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.77□□□□□ -1.49
COPAP53621 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
COPAP53621 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.77□□□□□ -1.49
COPAP53621 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COPAP53621 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COPAP53621 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
COPAP53621 RNU6-298P-201ENST00000390888 96 ntBASIC5.77□□□□□ -1.49
COPAP53621 RNA5SP296-201ENST00000410523 111 ntBASIC5.77□□□□□ -1.49
COPAP53621 RN7SKP279-201ENST00000411383 298 ntBASIC5.77□□□□□ -1.49
COPAP53621 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.77□□□□□ -1.49
COPAP53621 AC010385.1-201ENST00000412374 256 ntBASIC5.77□□□□□ -1.49
COPAP53621 AC016769.2-201ENST00000414815 475 ntBASIC5.77□□□□□ -1.49
COPAP53621 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.77□□□□□ -1.49
COPAP53621 CRIP1P1-201ENST00000427567 185 ntBASIC5.77□□□□□ -1.49
COPAP53621 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.77□□□□□ -1.49
COPAP53621 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.77□□□□□ -1.49
COPAP53621 MTCYBP15-201ENST00000433123 1127 ntBASIC5.77□□□□□ -1.49
COPAP53621 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.77□□□□□ -1.49
COPAP53621 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
COPAP53621 AL589765.3-201ENST00000446084 462 ntBASIC5.77□□□□□ -1.49
COPAP53621 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC5.77□□□□□ -1.49
COPAP53621 RPS20P4-201ENST00000461659 355 ntBASIC5.77□□□□□ -1.49
COPAP53621 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COPAP53621 RN7SL799P-201ENST00000475891 298 ntBASIC5.77□□□□□ -1.49
COPAP53621 EIF1P7-201ENST00000487533 337 ntBASIC5.77□□□□□ -1.49
COPAP53621 RN7SL547P-201ENST00000490793 290 ntBASIC5.77□□□□□ -1.49
COPAP53621 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.77□□□□□ -1.49
COPAP53621 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.77□□□□□ -1.49
COPAP53621 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.77□□□□□ -1.49
COPAP53621 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.77□□□□□ -1.49
COPAP53621 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.77□□□□□ -1.49
COPAP53621 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.77□□□□□ -1.49
COPAP53621 AC074255.1-201ENST00000511259 501 ntBASIC5.77□□□□□ -1.49
COPAP53621 BX510359.5-201ENST00000515651 304 ntBASIC5.77□□□□□ -1.49
COPAP53621 RNA5SP34-201ENST00000516887 130 ntBASIC5.77□□□□□ -1.49
COPAP53621 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC5.77□□□□□ -1.49
COPAP53621 AC034205.1-201ENST00000520621 638 ntBASIC5.77□□□□□ -1.49
COPAP53621 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.77□□□□□ -1.49
COPAP53621 OR4A43P-201ENST00000532938 908 ntBASIC5.77□□□□□ -1.49
COPAP53621 AP003717.3-201ENST00000544832 1180 ntBASIC5.77□□□□□ -1.49
COPAP53621 CYB5AP5-201ENST00000549779 389 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms