Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.9□□□□□ -1.3
RNF144AP50876 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC6.9□□□□□ -1.3
RNF144AP50876 MTCO1P27-201ENST00000448269 226 ntBASIC6.9□□□□□ -1.3
RNF144AP50876 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC6.9□□□□□ -1.3
RNF144AP50876 HIGD1AP16-201ENST00000450986 258 ntBASIC6.9□□□□□ -1.3
RNF144AP50876 VN1R6P-201ENST00000458417 907 ntBASIC6.9□□□□□ -1.3
RNF144AP50876 AC097493.1-201ENST00000463958 372 ntBASIC6.9□□□□□ -1.3
RNF144AP50876 RPL23AP82-208ENST00000496652 1112 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RNF144AP50876 AC005741.1-201ENST00000511094 432 ntBASIC6.9□□□□□ -1.3
RNF144AP50876 PGAM4P2-201ENST00000512491 721 ntBASIC6.9□□□□□ -1.3
RNF144AP50876 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.9□□□□□ -1.3
RNF144AP50876 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC6.9□□□□□ -1.3
RNF144AP50876 RNU4-49P-201ENST00000516080 140 ntBASIC6.9□□□□□ -1.3
RNF144AP50876 Vault.3-201ENST00000516676 95 ntBASIC6.9□□□□□ -1.3
RNF144AP50876 SNORD60.2-201ENST00000516883 86 ntBASIC6.9□□□□□ -1.3
RNF144AP50876 SNORA48.10-201ENST00000516965 160 ntBASIC6.9□□□□□ -1.3
RNF144AP50876 RN7SKP256-201ENST00000517201 314 ntBASIC6.9□□□□□ -1.3
RNF144AP50876 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC6.9□□□□□ -1.3
RNF144AP50876 OR7E96P-201ENST00000530816 976 ntBASIC6.9□□□□□ -1.3
RNF144AP50876 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC6.9□□□□□ -1.3
RNF144AP50876 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC6.9□□□□□ -1.3
RNF144AP50876 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC6.9□□□□□ -1.3
RNF144AP50876 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC6.9□□□□□ -1.3
RNF144AP50876 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC6.9□□□□□ -1.3
RNF144AP50876 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.9□□□□□ -1.3
RNF144AP50876 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.9□□□□□ -1.3
RNF144AP50876 AP001120.4-201ENST00000590231 108 ntBASIC6.9□□□□□ -1.3
RNF144AP50876 HNRNPA1P67-201ENST00000604027 926 ntBASIC6.9□□□□□ -1.3
RNF144AP50876 AL627309.6-201ENST00000606857 840 ntBASIC6.9□□□□□ -1.3
RNF144AP50876 AC078899.5-201ENST00000612475 178 ntBASIC6.9□□□□□ -1.3
RNF144AP50876 AC073488.8-201ENST00000631952 757 ntBASIC6.9□□□□□ -1.3
RNF144AP50876 AC016582.3-206ENST00000636547 207 ntBASIC6.9□□□□□ -1.3
RNF144AP50876 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.9□□□□□ -1.3
RNF144AP50876 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RNF144AP50876 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
RNF144AP50876 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
RNF144AP50876 KYNUP1-201ENST00000466683 1406 ntBASIC6.9□□□□□ -1.31
RNF144AP50876 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
RNF144AP50876 OFD1P9Y-201ENST00000417699 1491 ntBASIC6.9□□□□□ -1.31
RNF144AP50876 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
RNF144AP50876 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.31
RNF144AP50876 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
RNF144AP50876 SOCS5P5-201ENST00000402732 1586 ntBASIC6.9□□□□□ -1.31
RNF144AP50876 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
RNF144AP50876 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.9□□□□□ -1.31
RNF144AP50876 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
RNF144AP50876 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC6.9□□□□□ -1.31
RNF144AP50876 AC078880.4-201ENST00000617627 1749 ntBASIC6.9□□□□□ -1.31
RNF144AP50876 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
RNF144AP50876 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.31
RNF144AP50876 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
RNF144AP50876 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
RNF144AP50876 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RNF144AP50876 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RNF144AP50876 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC6.89□□□□□ -1.31
RNF144AP50876 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RNF144AP50876 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
RNF144AP50876 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RNF144AP50876 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RNF144AP50876 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RNF144AP50876 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RNF144AP50876 AC067945.1-201ENST00000342609 618 ntBASIC6.89□□□□□ -1.31
RNF144AP50876 U3.1-201ENST00000362500 215 ntBASIC6.89□□□□□ -1.31
RNF144AP50876 RNA5SP301-201ENST00000362537 121 ntBASIC6.89□□□□□ -1.31
RNF144AP50876 RNU6-666P-201ENST00000363499 107 ntBASIC6.89□□□□□ -1.31
RNF144AP50876 RN7SKP174-201ENST00000363803 330 ntBASIC6.89□□□□□ -1.31
RNF144AP50876 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
RNF144AP50876 MIR575-201ENST00000385013 94 ntBASIC6.89□□□□□ -1.31
RNF144AP50876 MIR568-201ENST00000385036 95 ntBASIC6.89□□□□□ -1.31
RNF144AP50876 RNU6-1106P-201ENST00000390845 107 ntBASIC6.89□□□□□ -1.31
RNF144AP50876 AC245036.1-201ENST00000391727 309 ntBASIC6.89□□□□□ -1.31
RNF144AP50876 RNU6-1148P-201ENST00000410992 104 ntBASIC6.89□□□□□ -1.31
RNF144AP50876 AC017035.1-201ENST00000411999 1115 ntBASIC6.89□□□□□ -1.31
RNF144AP50876 NDUFB4P5-201ENST00000415445 361 ntBASIC6.89□□□□□ -1.31
RNF144AP50876 VDAC1P10-201ENST00000416715 891 ntBASIC6.89□□□□□ -1.31
RNF144AP50876 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.89□□□□□ -1.31
RNF144AP50876 OR10T1P-201ENST00000424327 947 ntBASIC6.89□□□□□ -1.31
RNF144AP50876 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC6.89□□□□□ -1.31
RNF144AP50876 CBX3P6-201ENST00000430257 527 ntBASIC6.89□□□□□ -1.31
RNF144AP50876 AF274573.1-201ENST00000430535 494 ntBASIC6.89□□□□□ -1.31
RNF144AP50876 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.89□□□□□ -1.31
RNF144AP50876 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC6.89□□□□□ -1.31
RNF144AP50876 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.89□□□□□ -1.31
RNF144AP50876 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC6.89□□□□□ -1.31
RNF144AP50876 GAPDHP56-201ENST00000506031 988 ntBASIC6.89□□□□□ -1.31
RNF144AP50876 AC023886.1-201ENST00000506057 685 ntTSL 3 BASIC6.89□□□□□ -1.31
RNF144AP50876 AC098799.3-201ENST00000506095 438 ntBASIC6.89□□□□□ -1.31
RNF144AP50876 AC026700.1-201ENST00000512074 544 ntBASIC6.89□□□□□ -1.31
RNF144AP50876 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC6.89□□□□□ -1.31
RNF144AP50876 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC6.89□□□□□ -1.31
RNF144AP50876 AC022861.1-201ENST00000522981 663 ntBASIC6.89□□□□□ -1.31
RNF144AP50876 AP005597.2-201ENST00000526238 341 ntBASIC6.89□□□□□ -1.31
RNF144AP50876 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC6.89□□□□□ -1.31
RNF144AP50876 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.89□□□□□ -1.31
RNF144AP50876 AC044860.3-201ENST00000559957 368 ntBASIC6.89□□□□□ -1.31
RNF144AP50876 DNM1P31-201ENST00000564149 696 ntBASIC6.89□□□□□ -1.31
RNF144AP50876 AC136944.5-201ENST00000573021 151 ntBASIC6.89□□□□□ -1.31
RNF144AP50876 RN7SL178P-201ENST00000582930 304 ntBASIC6.89□□□□□ -1.31
RNF144AP50876 AC087763.1-201ENST00000603391 286 ntBASIC6.89□□□□□ -1.31
RNF144AP50876 BCRP9-201ENST00000605312 388 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms