Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AC064862.4-201ENST00000442180 334 ntBASIC4.52□□□□□ -1.69
CDX1P47902 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.52□□□□□ -1.69
CDX1P47902 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC4.52□□□□□ -1.69
CDX1P47902 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDX1P47902 AC022215.1-201ENST00000481770 362 ntBASIC4.52□□□□□ -1.69
CDX1P47902 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.52□□□□□ -1.69
CDX1P47902 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.52□□□□□ -1.69
CDX1P47902 AC098976.1-201ENST00000513014 541 ntBASIC4.52□□□□□ -1.69
CDX1P47902 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.52□□□□□ -1.69
CDX1P47902 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.52□□□□□ -1.69
CDX1P47902 AC112191.2-201ENST00000522428 333 ntBASIC4.52□□□□□ -1.69
CDX1P47902 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.52□□□□□ -1.69
CDX1P47902 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.52□□□□□ -1.69
CDX1P47902 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDX1P47902 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.52□□□□□ -1.69
CDX1P47902 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.52□□□□□ -1.69
CDX1P47902 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.52□□□□□ -1.69
CDX1P47902 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.52□□□□□ -1.69
CDX1P47902 AC011445.2-201ENST00000599274 173 ntBASIC4.52□□□□□ -1.69
CDX1P47902 AL513327.3-201ENST00000602618 469 ntBASIC4.52□□□□□ -1.69
CDX1P47902 AC123786.2-201ENST00000603459 275 ntBASIC4.52□□□□□ -1.69
CDX1P47902 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDX1P47902 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDX1P47902 MIR7973-1-201ENST00000614683 76 ntBASIC4.52□□□□□ -1.69
CDX1P47902 AL109620.1-201ENST00000618738 1197 ntBASIC4.52□□□□□ -1.69
CDX1P47902 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.52□□□□□ -1.69
CDX1P47902 AC083865.1-201ENST00000636634 831 ntBASIC4.52□□□□□ -1.69
CDX1P47902 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.52□□□□□ -1.69
CDX1P47902 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CDX1P47902 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.52□□□□□ -1.69
CDX1P47902 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDX1P47902 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.52□□□□□ -1.69
CDX1P47902 MTCO1P4-201ENST00000520516 1409 ntBASIC4.52□□□□□ -1.69
CDX1P47902 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CDX1P47902 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDX1P47902 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDX1P47902 AC011933.2-201ENST00000578539 2790 ntBASIC4.52□□□□□ -1.69
CDX1P47902 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
CDX1P47902 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDX1P47902 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDX1P47902 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CDX1P47902 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CDX1P47902 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CDX1P47902 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
CDX1P47902 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CDX1P47902 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.51□□□□□ -1.69
CDX1P47902 AL512422.1-201ENST00000407033 553 ntBASIC4.51□□□□□ -1.69
CDX1P47902 AC013404.1-201ENST00000413068 249 ntBASIC4.51□□□□□ -1.69
CDX1P47902 AL158825.1-201ENST00000414735 521 ntBASIC4.51□□□□□ -1.69
CDX1P47902 TCEA1P4-201ENST00000415066 844 ntBASIC4.51□□□□□ -1.69
CDX1P47902 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.51□□□□□ -1.69
CDX1P47902 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC4.51□□□□□ -1.69
CDX1P47902 NAP1L4P2-201ENST00000425958 899 ntBASIC4.51□□□□□ -1.69
CDX1P47902 NANOGP4-201ENST00000427230 913 ntBASIC4.51□□□□□ -1.69
CDX1P47902 RPS24P8-201ENST00000431490 402 ntBASIC4.51□□□□□ -1.69
CDX1P47902 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.51□□□□□ -1.69
CDX1P47902 RPS12P17-201ENST00000438591 377 ntBASIC4.51□□□□□ -1.69
CDX1P47902 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.51□□□□□ -1.69
CDX1P47902 CBX1P4-201ENST00000439415 457 ntBASIC4.51□□□□□ -1.69
CDX1P47902 MED6P1-201ENST00000439659 713 ntBASIC4.51□□□□□ -1.69
CDX1P47902 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.51□□□□□ -1.69
CDX1P47902 GTF3AP5-201ENST00000442645 697 ntBASIC4.51□□□□□ -1.69
CDX1P47902 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC4.51□□□□□ -1.69
CDX1P47902 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.51□□□□□ -1.69
CDX1P47902 AC110749.1-201ENST00000462007 357 ntBASIC4.51□□□□□ -1.69
CDX1P47902 UBFD1P1-201ENST00000473259 814 ntBASIC4.51□□□□□ -1.69
CDX1P47902 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CDX1P47902 MYL12BP2-201ENST00000503948 512 ntBASIC4.51□□□□□ -1.69
CDX1P47902 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.51□□□□□ -1.69
CDX1P47902 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC4.51□□□□□ -1.69
CDX1P47902 AC074255.1-201ENST00000511259 501 ntBASIC4.51□□□□□ -1.69
CDX1P47902 RNA5SP228-201ENST00000516232 133 ntBASIC4.51□□□□□ -1.69
CDX1P47902 MIR2117-201ENST00000516780 80 ntBASIC4.51□□□□□ -1.69
CDX1P47902 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC4.51□□□□□ -1.69
CDX1P47902 OR5AK3P-201ENST00000527486 1297 ntBASIC4.51□□□□□ -1.69
CDX1P47902 AP002812.4-201ENST00000532139 286 ntBASIC4.51□□□□□ -1.69
CDX1P47902 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CDX1P47902 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.51□□□□□ -1.69
CDX1P47902 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.51□□□□□ -1.69
CDX1P47902 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.51□□□□□ -1.69
CDX1P47902 AC010547.6-201ENST00000571789 193 ntBASIC4.51□□□□□ -1.69
CDX1P47902 MIR7853-201ENST00000584820 132 ntBASIC4.51□□□□□ -1.69
CDX1P47902 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.51□□□□□ -1.69
CDX1P47902 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC4.51□□□□□ -1.69
CDX1P47902 AC026741.1-201ENST00000605892 482 ntBASIC4.51□□□□□ -1.69
CDX1P47902 AC005014.3-201ENST00000605985 190 ntBASIC4.51□□□□□ -1.69
CDX1P47902 AC011374.2-201ENST00000607135 526 ntBASIC4.51□□□□□ -1.69
CDX1P47902 RMST_10.1-201ENST00000616309 154 ntBASIC4.51□□□□□ -1.69
CDX1P47902 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CDX1P47902 AP005431.1-201ENST00000618479 319 ntBASIC4.51□□□□□ -1.69
CDX1P47902 AC022106.2-201ENST00000620114 757 ntBASIC4.51□□□□□ -1.69
CDX1P47902 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.51□□□□□ -1.69
CDX1P47902 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CDX1P47902 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.51□□□□□ -1.69
CDX1P47902 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.51□□□□□ -1.69
CDX1P47902 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CDX1P47902 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CDX1P47902 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CDX1P47902 AL034370.1-201ENST00000397254 1590 ntBASIC4.51□□□□□ -1.69
CDX1P47902 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms