Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
CDH3P22223 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
CDH3P22223 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
CDH3P22223 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.15□□□□□ -1.58
CDH3P22223 RNU1-43P-201ENST00000365052 165 ntBASIC5.15□□□□□ -1.59
CDH3P22223 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CDH3P22223 AL359643.1-201ENST00000404109 423 ntBASIC5.15□□□□□ -1.59
CDH3P22223 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.15□□□□□ -1.59
CDH3P22223 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.15□□□□□ -1.59
CDH3P22223 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CDH3P22223 AC017019.1-201ENST00000426129 261 ntBASIC5.15□□□□□ -1.59
CDH3P22223 NPM1P26-201ENST00000426339 738 ntBASIC5.15□□□□□ -1.59
CDH3P22223 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.15□□□□□ -1.59
CDH3P22223 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.15□□□□□ -1.59
CDH3P22223 TMX2P1-201ENST00000436507 708 ntBASIC5.15□□□□□ -1.59
CDH3P22223 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.15□□□□□ -1.59
CDH3P22223 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.15□□□□□ -1.59
CDH3P22223 AC022431.1-201ENST00000450941 438 ntBASIC5.15□□□□□ -1.59
CDH3P22223 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.15□□□□□ -1.59
CDH3P22223 AP000942.1-201ENST00000463969 747 ntBASIC5.15□□□□□ -1.59
CDH3P22223 RPL15P21-201ENST00000495592 567 ntBASIC5.15□□□□□ -1.59
CDH3P22223 OR5M14P-201ENST00000506803 618 ntBASIC5.15□□□□□ -1.59
CDH3P22223 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.15□□□□□ -1.59
CDH3P22223 AC021106.1-201ENST00000509020 1058 ntBASIC5.15□□□□□ -1.59
CDH3P22223 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.15□□□□□ -1.59
CDH3P22223 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.15□□□□□ -1.59
CDH3P22223 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
CDH3P22223 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.15□□□□□ -1.59
CDH3P22223 OR8G3P-201ENST00000533406 921 ntBASIC5.15□□□□□ -1.59
CDH3P22223 YWHABP2-201ENST00000540201 713 ntBASIC5.15□□□□□ -1.59
CDH3P22223 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.15□□□□□ -1.59
CDH3P22223 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.15□□□□□ -1.59
CDH3P22223 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.15□□□□□ -1.59
CDH3P22223 AC009027.1-201ENST00000604510 479 ntBASIC5.15□□□□□ -1.59
CDH3P22223 AC005252.1-201ENST00000604518 1063 ntBASIC5.15□□□□□ -1.59
CDH3P22223 RPL21P136-201ENST00000605378 396 ntBASIC5.15□□□□□ -1.59
CDH3P22223 AC023813.4-201ENST00000607580 580 ntBASIC5.15□□□□□ -1.59
CDH3P22223 MIR6719-201ENST00000622428 87 ntBASIC5.15□□□□□ -1.59
CDH3P22223 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.15□□□□□ -1.59
CDH3P22223 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.15□□□□□ -1.59
CDH3P22223 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.15□□□□□ -1.59
CDH3P22223 ZNF733P-202ENST00000444809 1573 ntBASIC5.15□□□□□ -1.59
CDH3P22223 AL359715.3-201ENST00000569267 2123 ntBASIC5.15□□□□□ -1.59
CDH3P22223 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDH3P22223 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.15□□□□□ -1.59
CDH3P22223 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDH3P22223 OR10AB1P-202ENST00000641219 1686 ntBASIC5.15□□□□□ -1.59
CDH3P22223 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.14□□□□□ -1.59
CDH3P22223 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CDH3P22223 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CDH3P22223 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
CDH3P22223 AC104118.1-201ENST00000607625 1589 ntBASIC5.14□□□□□ -1.59
CDH3P22223 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDH3P22223 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDH3P22223 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDH3P22223 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDH3P22223 AMZ2P2-201ENST00000406819 1057 ntBASIC5.14□□□□□ -1.59
CDH3P22223 SPTLC1P2-201ENST00000407089 121 ntBASIC5.14□□□□□ -1.59
CDH3P22223 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CDH3P22223 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.14□□□□□ -1.59
CDH3P22223 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.14□□□□□ -1.59
CDH3P22223 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.14□□□□□ -1.59
CDH3P22223 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.14□□□□□ -1.59
CDH3P22223 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.14□□□□□ -1.59
CDH3P22223 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.14□□□□□ -1.59
CDH3P22223 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC5.14□□□□□ -1.59
CDH3P22223 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.14□□□□□ -1.59
CDH3P22223 RN7SL423P-201ENST00000486202 304 ntBASIC5.14□□□□□ -1.59
CDH3P22223 RWDD4P1-201ENST00000488019 565 ntBASIC5.14□□□□□ -1.59
CDH3P22223 AC015864.1-201ENST00000496512 544 ntBASIC5.14□□□□□ -1.59
CDH3P22223 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.14□□□□□ -1.59
CDH3P22223 AC021193.1-201ENST00000511607 420 ntBASIC5.14□□□□□ -1.59
CDH3P22223 AC098976.1-201ENST00000513014 541 ntBASIC5.14□□□□□ -1.59
CDH3P22223 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.14□□□□□ -1.59
CDH3P22223 AC107918.3-201ENST00000533272 382 ntBASIC5.14□□□□□ -1.59
CDH3P22223 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.14□□□□□ -1.59
CDH3P22223 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.14□□□□□ -1.59
CDH3P22223 MIR7853-201ENST00000584820 132 ntBASIC5.14□□□□□ -1.59
CDH3P22223 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.14□□□□□ -1.59
CDH3P22223 AC084036.1-201ENST00000609190 508 ntBASIC5.14□□□□□ -1.59
CDH3P22223 BX323046.1-201ENST00000610145 535 ntBASIC5.14□□□□□ -1.59
CDH3P22223 AC091932.2-201ENST00000623014 291 ntBASIC5.14□□□□□ -1.59
CDH3P22223 AP003400.6-201ENST00000624698 740 ntBASIC5.14□□□□□ -1.59
CDH3P22223 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.14□□□□□ -1.59
CDH3P22223 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.14□□□□□ -1.59
CDH3P22223 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
CDH3P22223 AC109780.1-201ENST00000451768 1344 ntBASIC5.14□□□□□ -1.59
CDH3P22223 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.14□□□□□ -1.59
CDH3P22223 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDH3P22223 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.13□□□□□ -1.59
CDH3P22223 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.13□□□□□ -1.59
CDH3P22223 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDH3P22223 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.13□□□□□ -1.59
CDH3P22223 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDH3P22223 AL450326.2-201ENST00000421913 1962 ntBASIC5.13□□□□□ -1.59
CDH3P22223 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDH3P22223 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CDH3P22223 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CDH3P22223 MAPK10-349ENST00000641767 3661 ntBASIC5.13□□□□□ -1.59
CDH3P22223 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms