Protein–RNA interactions for Protein: P18827

SDC1, Syndecan-1, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1P18827 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SDC1P18827 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SDC1P18827 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.68□□□□□ -1.66
SDC1P18827 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.68□□□□□ -1.66
SDC1P18827 THAP12P4-201ENST00000528321 2266 ntBASIC4.67□□□□□ -1.66
SDC1P18827 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SDC1P18827 AC008758.3-201ENST00000507003 1829 ntBASIC4.67□□□□□ -1.66
SDC1P18827 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
SDC1P18827 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SDC1P18827 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SDC1P18827 ZNF733P-202ENST00000444809 1573 ntBASIC4.67□□□□□ -1.66
SDC1P18827 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SDC1P18827 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SDC1P18827 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SDC1P18827 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.67□□□□□ -1.66
SDC1P18827 AL672167.2-201ENST00000377164 879 ntBASIC4.67□□□□□ -1.66
SDC1P18827 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SDC1P18827 U3.35-201ENST00000408405 208 ntBASIC4.67□□□□□ -1.66
SDC1P18827 MIR1271-201ENST00000408537 86 ntBASIC4.67□□□□□ -1.66
SDC1P18827 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.67□□□□□ -1.66
SDC1P18827 AF186996.5-201ENST00000418098 904 ntBASIC4.67□□□□□ -1.66
SDC1P18827 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.67□□□□□ -1.66
SDC1P18827 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.67□□□□□ -1.66
SDC1P18827 MAPRE1P3-201ENST00000435438 796 ntBASIC4.67□□□□□ -1.66
SDC1P18827 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.67□□□□□ -1.66
SDC1P18827 RPL12P11-201ENST00000439970 501 ntBASIC4.67□□□□□ -1.66
SDC1P18827 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.67□□□□□ -1.66
SDC1P18827 CNOT7P2-201ENST00000441051 832 ntBASIC4.67□□□□□ -1.66
SDC1P18827 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.67□□□□□ -1.66
SDC1P18827 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.67□□□□□ -1.66
SDC1P18827 RPL31P53-201ENST00000457065 348 ntBASIC4.67□□□□□ -1.66
SDC1P18827 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.67□□□□□ -1.66
SDC1P18827 BX284632.1-201ENST00000478218 541 ntBASIC4.67□□□□□ -1.66
SDC1P18827 AC090114.3-201ENST00000479267 829 ntBASIC4.67□□□□□ -1.66
SDC1P18827 ATG10-AS1-201ENST00000504846 648 ntBASIC4.67□□□□□ -1.66
SDC1P18827 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.67□□□□□ -1.66
SDC1P18827 AC106872.4-201ENST00000510050 523 ntBASIC4.67□□□□□ -1.66
SDC1P18827 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.67□□□□□ -1.66
SDC1P18827 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
SDC1P18827 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.67□□□□□ -1.66
SDC1P18827 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.67□□□□□ -1.66
SDC1P18827 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.67□□□□□ -1.66
SDC1P18827 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
SDC1P18827 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.67□□□□□ -1.66
SDC1P18827 TVP23CP2-201ENST00000571473 623 ntBASIC4.67□□□□□ -1.66
SDC1P18827 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.67□□□□□ -1.66
SDC1P18827 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.67□□□□□ -1.66
SDC1P18827 MIR4691-201ENST00000583764 85 ntBASIC4.67□□□□□ -1.66
SDC1P18827 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.67□□□□□ -1.66
SDC1P18827 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.67□□□□□ -1.66
SDC1P18827 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.67□□□□□ -1.66
SDC1P18827 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.67□□□□□ -1.66
SDC1P18827 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.67□□□□□ -1.66
SDC1P18827 OR8G7P-201ENST00000616658 848 ntBASIC4.67□□□□□ -1.66
SDC1P18827 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SDC1P18827 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SDC1P18827 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
SDC1P18827 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.67□□□□□ -1.66
SDC1P18827 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SDC1P18827 AL022322.2-201ENST00000624072 20397 ntBASIC4.67□□□□□ -1.66
SDC1P18827 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SDC1P18827 MTND5P23-201ENST00000430812 1655 ntBASIC4.67□□□□□ -1.66
SDC1P18827 AC245100.2-201ENST00000454544 1679 ntBASIC4.67□□□□□ -1.66
SDC1P18827 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SDC1P18827 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
SDC1P18827 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SDC1P18827 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SDC1P18827 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.66□□□□□ -1.66
SDC1P18827 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.66□□□□□ -1.66
SDC1P18827 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SDC1P18827 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.66□□□□□ -1.66
SDC1P18827 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SDC1P18827 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.66□□□□□ -1.66
SDC1P18827 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SDC1P18827 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SDC1P18827 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.66□□□□□ -1.66
SDC1P18827 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.66□□□□□ -1.66
SDC1P18827 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SDC1P18827 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.66□□□□□ -1.66
SDC1P18827 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SDC1P18827 DHX9P1-201ENST00000436565 3076 ntBASIC4.66□□□□□ -1.66
SDC1P18827 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SDC1P18827 RNA5SP428-201ENST00000365129 132 ntBASIC4.66□□□□□ -1.66
SDC1P18827 RNA5SP455-201ENST00000365190 119 ntBASIC4.66□□□□□ -1.66
SDC1P18827 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SDC1P18827 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.66□□□□□ -1.66
SDC1P18827 RNU6-171P-201ENST00000384354 107 ntBASIC4.66□□□□□ -1.66
SDC1P18827 AL359643.1-201ENST00000404109 423 ntBASIC4.66□□□□□ -1.66
SDC1P18827 AP000580.1-201ENST00000404439 358 ntBASIC4.66□□□□□ -1.66
SDC1P18827 RN7SKP206-201ENST00000410823 293 ntBASIC4.66□□□□□ -1.66
SDC1P18827 RNU6-564P-201ENST00000410983 104 ntBASIC4.66□□□□□ -1.66
SDC1P18827 TBCAP2-201ENST00000416175 326 ntBASIC4.66□□□□□ -1.66
SDC1P18827 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.66□□□□□ -1.66
SDC1P18827 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SDC1P18827 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.66□□□□□ -1.66
SDC1P18827 AL163193.1-201ENST00000444895 788 ntBASIC4.66□□□□□ -1.66
SDC1P18827 AURKAPS1-201ENST00000451805 1212 ntBASIC4.66□□□□□ -1.66
SDC1P18827 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.66□□□□□ -1.66
SDC1P18827 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SDC1P18827 RNA5SP103-201ENST00000459503 118 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms