Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 RNU6-452P-201ENST00000384406 107 ntBASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 Y_RNA.560-201ENST00000384689 102 ntBASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 AL590084.2-201ENST00000401481 382 ntBASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 AGR3-202ENST00000402239 563 ntTSL 2 BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 AC013404.1-201ENST00000413068 249 ntBASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 AC027644.1-201ENST00000419595 298 ntBASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 AC006960.1-201ENST00000419980 153 ntBASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 CDC27P1-201ENST00000445384 715 ntBASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 TPT1P14-201ENST00000448018 505 ntBASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 AC092001.1-201ENST00000453012 261 ntBASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 AC239798.3-201ENST00000454459 408 ntBASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 HNRNPDLP3-201ENST00000456745 380 ntBASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 AMD1P1-201ENST00000457220 922 ntBASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 AC026348.1-201ENST00000462549 1053 ntBASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 TSACC-207ENST00000470342 601 ntTSL 2 BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 AC092865.4-201ENST00000477936 615 ntBASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 RPL23AP37-201ENST00000479658 549 ntBASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 AC008638.1-201ENST00000506035 866 ntBASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 CBX3P3-201ENST00000508108 532 ntBASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 AC114781.4-201ENST00000513707 639 ntBASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 RNA5SP362-201ENST00000516048 118 ntBASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 IGKV2-19-201ENST00000518132 283 ntBASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 DUXAP2-201ENST00000519198 589 ntBASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 MYL6-213ENST00000549017 502 ntTSL 3 BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 MTCO1P40-201ENST00000574371 625 ntBASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 MIR3176-201ENST00000582210 90 ntBASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 AC007684.1-201ENST00000609671 477 ntBASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 AC100793.4-201ENST00000613683 429 ntBASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 AC026368.1-201ENST00000614934 690 ntBASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 AC092794.2-201ENST00000620933 563 ntBASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 Y_RNA.359-201ENST00000365498 102 ntBASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 RNU6-157P-201ENST00000383957 107 ntBASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 RNU6-1119P-201ENST00000384349 108 ntBASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 SNORA26.8-201ENST00000391306 124 ntBASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 MIR1178-201ENST00000408396 91 ntBASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 PGBD4P8-201ENST00000412993 562 ntBASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 OR13K1P-201ENST00000444577 975 ntBASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 ZNF619P1-201ENST00000446539 752 ntBASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 GAS5-218ENST00000448718 565 ntTSL 2 BASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 PSAT1P4-201ENST00000466500 526 ntBASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 RPL35AP19-201ENST00000469425 329 ntBASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 AC126182.1-201ENST00000478134 357 ntBASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 AC124945.1-201ENST00000485133 188 ntBASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 NPM1P27-201ENST00000502784 830 ntBASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 AC008885.2-201ENST00000509506 930 ntBASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 RNU6-1004P-201ENST00000516584 111 ntBASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 AC109635.6-201ENST00000525487 1113 ntBASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 HIGD1AP10-201ENST00000527837 282 ntBASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 AC009120.3-201ENST00000563335 499 ntBASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 SNORD39.2-201ENST00000579995 76 ntBASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 MIR4776-2-201ENST00000580204 80 ntBASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 COX6CP7-201ENST00000597056 208 ntBASIC8.23□□□□□ -1.09
CSB-PGBD3P0DP91 LSM1P2-201ENST00000604911 322 ntBASIC8.23□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms