Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.36□□□□□ -1.71
FREM3P0C091 EIF4A1P1-201ENST00000420241 934 ntBASIC4.36□□□□□ -1.71
FREM3P0C091 E2F6P2-201ENST00000420708 748 ntBASIC4.36□□□□□ -1.71
FREM3P0C091 COX6CP13-201ENST00000428703 226 ntBASIC4.36□□□□□ -1.71
FREM3P0C091 RPS26P4-201ENST00000431743 355 ntBASIC4.36□□□□□ -1.71
FREM3P0C091 RPS17P8-201ENST00000434525 335 ntBASIC4.36□□□□□ -1.71
FREM3P0C091 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.36□□□□□ -1.71
FREM3P0C091 RPL35AP21-201ENST00000437667 333 ntBASIC4.36□□□□□ -1.71
FREM3P0C091 AL772161.1-201ENST00000439130 476 ntBASIC4.36□□□□□ -1.71
FREM3P0C091 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.36□□□□□ -1.71
FREM3P0C091 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.36□□□□□ -1.71
FREM3P0C091 BTF3P6-201ENST00000448054 499 ntBASIC4.36□□□□□ -1.71
FREM3P0C091 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.36□□□□□ -1.71
FREM3P0C091 RPS5P7-201ENST00000456664 608 ntBASIC4.36□□□□□ -1.71
FREM3P0C091 AL591473.1-201ENST00000464297 313 ntBASIC4.36□□□□□ -1.71
FREM3P0C091 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.36□□□□□ -1.71
FREM3P0C091 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.36□□□□□ -1.71
FREM3P0C091 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.36□□□□□ -1.71
FREM3P0C091 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
FREM3P0C091 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.36□□□□□ -1.71
FREM3P0C091 RN7SL652P-201ENST00000577769 300 ntBASIC4.36□□□□□ -1.71
FREM3P0C091 AC112198.2-201ENST00000426589 6996 ntBASIC4.36□□□□□ -1.71
FREM3P0C091 AL034370.1-201ENST00000397254 1590 ntBASIC4.36□□□□□ -1.71
FREM3P0C091 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
FREM3P0C091 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
FREM3P0C091 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
FREM3P0C091 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
FREM3P0C091 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
FREM3P0C091 AC010928.1-201ENST00000592477 1447 ntBASIC4.36□□□□□ -1.71
FREM3P0C091 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
FREM3P0C091 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
FREM3P0C091 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC4.36□□□□□ -1.71
FREM3P0C091 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC4.36□□□□□ -1.71
FREM3P0C091 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
FREM3P0C091 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
FREM3P0C091 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.36□□□□□ -1.71
FREM3P0C091 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.36□□□□□ -1.71
FREM3P0C091 SNORA70F-201ENST00000384142 135 ntBASIC4.36□□□□□ -1.71
FREM3P0C091 FAR2P2-201ENST00000413041 594 ntBASIC4.36□□□□□ -1.71
FREM3P0C091 FAR2P4-202ENST00000425399 584 ntBASIC4.36□□□□□ -1.71
FREM3P0C091 AC007559.1-201ENST00000428736 355 ntBASIC4.36□□□□□ -1.71
FREM3P0C091 ARL2BPP10-201ENST00000446487 531 ntBASIC4.36□□□□□ -1.71
FREM3P0C091 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.36□□□□□ -1.71
FREM3P0C091 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.36□□□□□ -1.71
FREM3P0C091 SNORA70.11-201ENST00000515987 138 ntBASIC4.36□□□□□ -1.71
FREM3P0C091 SNORA70.13-201ENST00000516116 138 ntBASIC4.36□□□□□ -1.71
FREM3P0C091 RNA5SP303-201ENST00000516192 130 ntBASIC4.36□□□□□ -1.71
FREM3P0C091 RPL23AP53-201ENST00000521854 457 ntBASIC4.36□□□□□ -1.71
FREM3P0C091 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.36□□□□□ -1.71
FREM3P0C091 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.36□□□□□ -1.71
FREM3P0C091 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.36□□□□□ -1.71
FREM3P0C091 AC009852.2-201ENST00000567898 485 ntBASIC4.36□□□□□ -1.71
FREM3P0C091 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.36□□□□□ -1.71
FREM3P0C091 AF230666.2-201ENST00000602328 725 ntBASIC4.36□□□□□ -1.71
FREM3P0C091 AC004232.3-201ENST00000622977 525 ntBASIC4.36□□□□□ -1.71
FREM3P0C091 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
FREM3P0C091 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
FREM3P0C091 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.35□□□□□ -1.71
FREM3P0C091 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
FREM3P0C091 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
FREM3P0C091 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
FREM3P0C091 AC139713.2-214ENST00000642059 1811 ntBASIC4.35□□□□□ -1.71
FREM3P0C091 SDAD1P1-202ENST00000524156 2051 ntBASIC4.35□□□□□ -1.71
FREM3P0C091 FABP7P1-201ENST00000424004 391 ntBASIC4.35□□□□□ -1.71
FREM3P0C091 AC016712.1-201ENST00000431088 378 ntBASIC4.35□□□□□ -1.71
FREM3P0C091 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.35□□□□□ -1.71
FREM3P0C091 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.35□□□□□ -1.71
FREM3P0C091 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.35□□□□□ -1.71
FREM3P0C091 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
FREM3P0C091 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.35□□□□□ -1.71
FREM3P0C091 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
FREM3P0C091 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
FREM3P0C091 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
FREM3P0C091 AC025574.1-201ENST00000554784 1653 ntBASIC4.35□□□□□ -1.71
FREM3P0C091 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.35□□□□□ -1.71
FREM3P0C091 AC012618.3-205ENST00000637896 1496 ntBASIC4.35□□□□□ -1.71
FREM3P0C091 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
FREM3P0C091 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.35□□□□□ -1.71
FREM3P0C091 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
FREM3P0C091 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
FREM3P0C091 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.34□□□□□ -1.71
FREM3P0C091 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
FREM3P0C091 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
FREM3P0C091 TBCAP2-201ENST00000416175 326 ntBASIC4.34□□□□□ -1.71
FREM3P0C091 HMGB1P32-201ENST00000425971 565 ntBASIC4.34□□□□□ -1.71
FREM3P0C091 AL451139.1-201ENST00000434718 346 ntBASIC4.34□□□□□ -1.71
FREM3P0C091 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
FREM3P0C091 RN7SL205P-201ENST00000490174 284 ntBASIC4.34□□□□□ -1.71
FREM3P0C091 AC026688.1-201ENST00000520639 1168 ntBASIC4.34□□□□□ -1.71
FREM3P0C091 AC008147.3-201ENST00000548666 354 ntBASIC4.34□□□□□ -1.71
FREM3P0C091 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
FREM3P0C091 RN7SL52P-201ENST00000584271 284 ntBASIC4.34□□□□□ -1.71
FREM3P0C091 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.34□□□□□ -1.71
FREM3P0C091 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.34□□□□□ -1.71
FREM3P0C091 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.34□□□□□ -1.71
FREM3P0C091 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.34□□□□□ -1.71
FREM3P0C091 RN7SL722P-201ENST00000617780 284 ntBASIC4.34□□□□□ -1.71
FREM3P0C091 RN7SL565P-201ENST00000618246 284 ntBASIC4.34□□□□□ -1.71
FREM3P0C091 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
FREM3P0C091 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms