Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DPB1P04440 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DPB1P04440 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
HLA-DPB1P04440 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DPB1P04440 AC108751.5-201ENST00000492880 1336 ntBASIC4.39□□□□□ -1.71
HLA-DPB1P04440 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DPB1P04440 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DPB1P04440 MAPK10-349ENST00000641767 3661 ntBASIC4.39□□□□□ -1.71
HLA-DPB1P04440 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.39□□□□□ -1.71
HLA-DPB1P04440 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
HLA-DPB1P04440 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DPB1P04440 AC009643.2-201ENST00000603543 1448 ntBASIC4.38□□□□□ -1.71
HLA-DPB1P04440 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DPB1P04440 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
HLA-DPB1P04440 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DPB1P04440 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DPB1P04440 AL590763.1-201ENST00000398297 1545 ntBASIC4.38□□□□□ -1.71
HLA-DPB1P04440 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DPB1P04440 ICE2P1-201ENST00000512800 1849 ntBASIC4.38□□□□□ -1.71
HLA-DPB1P04440 AL353625.1-202ENST00000366273 571 ntBASIC4.38□□□□□ -1.71
HLA-DPB1P04440 SNORA66-201ENST00000384792 133 ntBASIC4.38□□□□□ -1.71
HLA-DPB1P04440 RPL21P108-201ENST00000413857 481 ntBASIC4.38□□□□□ -1.71
HLA-DPB1P04440 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.38□□□□□ -1.71
HLA-DPB1P04440 E2F6P2-201ENST00000420708 748 ntBASIC4.38□□□□□ -1.71
HLA-DPB1P04440 NFYAP1-201ENST00000431953 972 ntBASIC4.38□□□□□ -1.71
HLA-DPB1P04440 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.38□□□□□ -1.71
HLA-DPB1P04440 AC092647.2-201ENST00000452998 253 ntBASIC4.38□□□□□ -1.71
HLA-DPB1P04440 AL389915.2-201ENST00000454576 441 ntBASIC4.38□□□□□ -1.71
HLA-DPB1P04440 AC005008.1-201ENST00000456151 612 ntBASIC4.38□□□□□ -1.71
HLA-DPB1P04440 AC110749.1-201ENST00000462007 357 ntBASIC4.38□□□□□ -1.71
HLA-DPB1P04440 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.38□□□□□ -1.71
HLA-DPB1P04440 AC074386.1-201ENST00000476560 767 ntBASIC4.38□□□□□ -1.71
HLA-DPB1P04440 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.38□□□□□ -1.71
HLA-DPB1P04440 IGLV2-28-201ENST00000520681 304 ntBASIC4.38□□□□□ -1.71
HLA-DPB1P04440 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-DPB1P04440 OR4A46P-201ENST00000527255 933 ntBASIC4.38□□□□□ -1.71
HLA-DPB1P04440 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.38□□□□□ -1.71
HLA-DPB1P04440 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.38□□□□□ -1.71
HLA-DPB1P04440 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-DPB1P04440 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.38□□□□□ -1.71
HLA-DPB1P04440 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-DPB1P04440 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.38□□□□□ -1.71
HLA-DPB1P04440 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.38□□□□□ -1.71
HLA-DPB1P04440 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.38□□□□□ -1.71
HLA-DPB1P04440 uc_338.18-201ENST00000615451 175 ntBASIC4.38□□□□□ -1.71
HLA-DPB1P04440 AC015660.5-201ENST00000623238 564 ntBASIC4.38□□□□□ -1.71
HLA-DPB1P04440 AC099494.2-201ENST00000623371 978 ntBASIC4.38□□□□□ -1.71
HLA-DPB1P04440 AP003400.2-201ENST00000624036 666 ntBASIC4.38□□□□□ -1.71
HLA-DPB1P04440 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DPB1P04440 C4BPAP1-201ENST00000415474 1893 ntBASIC4.38□□□□□ -1.71
HLA-DPB1P04440 CIR1P2-201ENST00000514821 1342 ntBASIC4.38□□□□□ -1.71
HLA-DPB1P04440 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DPB1P04440 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DPB1P04440 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
HLA-DPB1P04440 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
HLA-DPB1P04440 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DPB1P04440 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DPB1P04440 RARSP1-201ENST00000542842 1418 ntBASIC4.38□□□□□ -1.71
HLA-DPB1P04440 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DPB1P04440 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DPB1P04440 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.37□□□□□ -1.71
HLA-DPB1P04440 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DPB1P04440 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
HLA-DPB1P04440 PANDAR-201ENST00000629595 1506 ntBASIC4.37□□□□□ -1.71
HLA-DPB1P04440 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.37□□□□□ -1.71
HLA-DPB1P04440 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DPB1P04440 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DPB1P04440 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
HLA-DPB1P04440 VDAC1P9-201ENST00000412766 841 ntBASIC4.37□□□□□ -1.71
HLA-DPB1P04440 SEPT7P8-201ENST00000413308 775 ntBASIC4.37□□□□□ -1.71
HLA-DPB1P04440 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.37□□□□□ -1.71
HLA-DPB1P04440 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DPB1P04440 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DPB1P04440 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.37□□□□□ -1.71
HLA-DPB1P04440 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DPB1P04440 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.37□□□□□ -1.71
HLA-DPB1P04440 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DPB1P04440 AC004938.1-201ENST00000438468 308 ntBASIC4.37□□□□□ -1.71
HLA-DPB1P04440 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.37□□□□□ -1.71
HLA-DPB1P04440 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.37□□□□□ -1.71
HLA-DPB1P04440 DEFB109F-201ENST00000491870 277 ntBASIC4.37□□□□□ -1.71
HLA-DPB1P04440 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DPB1P04440 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.37□□□□□ -1.71
HLA-DPB1P04440 SCARNA21.2-201ENST00000516600 166 ntBASIC4.37□□□□□ -1.71
HLA-DPB1P04440 RNU6-943P-201ENST00000516960 98 ntBASIC4.37□□□□□ -1.71
HLA-DPB1P04440 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.37□□□□□ -1.71
HLA-DPB1P04440 AP002373.2-201ENST00000541631 1060 ntBASIC4.37□□□□□ -1.71
HLA-DPB1P04440 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DPB1P04440 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.37□□□□□ -1.71
HLA-DPB1P04440 ATP5J2P6-201ENST00000565203 266 ntBASIC4.37□□□□□ -1.71
HLA-DPB1P04440 MIR3691-201ENST00000578066 90 ntBASIC4.37□□□□□ -1.71
HLA-DPB1P04440 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.37□□□□□ -1.71
HLA-DPB1P04440 AL049794.2-201ENST00000616301 365 ntBASIC4.37□□□□□ -1.71
HLA-DPB1P04440 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.37□□□□□ -1.71
HLA-DPB1P04440 AC012414.7-202ENST00000622705 1090 ntBASIC4.37□□□□□ -1.71
HLA-DPB1P04440 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DPB1P04440 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.37□□□□□ -1.71
HLA-DPB1P04440 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HLA-DPB1P04440 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.37□□□□□ -1.71
HLA-DPB1P04440 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms