Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
P04436 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
P04436 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
P04436 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.59□□□□□ -1.67
P04436 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
P04436 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
P04436 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.59□□□□□ -1.67
P04436 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
P04436 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.59□□□□□ -1.67
P04436 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
P04436 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
P04436 SNORA70.10-201ENST00000384515 134 ntBASIC4.59□□□□□ -1.67
P04436 MT-RNR1-201ENST00000389680 954 ntBASIC4.59□□□□□ -1.67
P04436 AL356317.1-201ENST00000396110 1436 ntBASIC4.59□□□□□ -1.67
P04436 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
P04436 AL136116.2-201ENST00000404020 785 ntBASIC4.59□□□□□ -1.67
P04436 RPL5P19-201ENST00000404228 893 ntBASIC4.59□□□□□ -1.67
P04436 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.59□□□□□ -1.67
P04436 SNORA77-201ENST00000408716 125 ntBASIC4.59□□□□□ -1.67
P04436 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.59□□□□□ -1.67
P04436 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.59□□□□□ -1.67
P04436 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.59□□□□□ -1.67
P04436 OR51A6P-201ENST00000418680 1004 ntBASIC4.59□□□□□ -1.67
P04436 RPS26P13-201ENST00000419030 330 ntBASIC4.59□□□□□ -1.67
P04436 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
P04436 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.59□□□□□ -1.67
P04436 BX323845.1-201ENST00000432417 179 ntBASIC4.59□□□□□ -1.67
P04436 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.59□□□□□ -1.67
P04436 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
P04436 AC046176.1-201ENST00000435260 1170 ntBASIC4.59□□□□□ -1.67
P04436 RHOT1P3-201ENST00000436571 331 ntBASIC4.59□□□□□ -1.67
P04436 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.59□□□□□ -1.67
P04436 OR52E3P-201ENST00000452083 936 ntBASIC4.59□□□□□ -1.67
P04436 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.59□□□□□ -1.67
P04436 RPS3AP41-201ENST00000462701 778 ntBASIC4.59□□□□□ -1.67
P04436 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
P04436 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.59□□□□□ -1.67
P04436 RN7SL441P-201ENST00000492388 296 ntBASIC4.59□□□□□ -1.67
P04436 AL049874.2-201ENST00000492636 288 ntBASIC4.59□□□□□ -1.67
P04436 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.59□□□□□ -1.67
P04436 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.59□□□□□ -1.67
P04436 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.59□□□□□ -1.67
P04436 AC016559.2-201ENST00000510759 359 ntBASIC4.59□□□□□ -1.67
P04436 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.59□□□□□ -1.67
P04436 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.59□□□□□ -1.67
P04436 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
P04436 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.67
P04436 AC008033.2-201ENST00000542626 177 ntBASIC4.59□□□□□ -1.67
P04436 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.59□□□□□ -1.67
P04436 TVP23CP2-201ENST00000571473 623 ntBASIC4.59□□□□□ -1.67
P04436 MTCYBP13-201ENST00000578634 1093 ntBASIC4.59□□□□□ -1.67
P04436 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.59□□□□□ -1.67
P04436 FAM106CP-201ENST00000582212 507 ntBASIC4.59□□□□□ -1.67
P04436 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.59□□□□□ -1.67
P04436 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.59□□□□□ -1.67
P04436 AL135786.2-201ENST00000608422 615 ntBASIC4.59□□□□□ -1.67
P04436 AC026367.3-201ENST00000619032 590 ntBASIC4.59□□□□□ -1.67
P04436 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.59□□□□□ -1.67
P04436 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.59□□□□□ -1.67
P04436 AC022417.1-201ENST00000624768 1303 ntBASIC4.59□□□□□ -1.67
P04436 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.59□□□□□ -1.67
P04436 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
P04436 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
P04436 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
P04436 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
P04436 AC063976.2-201ENST00000425667 3556 ntBASIC4.58□□□□□ -1.68
P04436 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
P04436 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
P04436 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
P04436 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.58□□□□□ -1.68
P04436 MIR365B-201ENST00000362317 111 ntBASIC4.58□□□□□ -1.68
P04436 RN7SKP149-201ENST00000363008 344 ntBASIC4.58□□□□□ -1.68
P04436 AL035419.1-201ENST00000397037 564 ntBASIC4.58□□□□□ -1.68
P04436 RPL12P9-201ENST00000412942 488 ntBASIC4.58□□□□□ -1.68
P04436 AF186996.5-201ENST00000418098 904 ntBASIC4.58□□□□□ -1.68
P04436 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.58□□□□□ -1.68
P04436 OR2AM1P-201ENST00000422137 422 ntBASIC4.58□□□□□ -1.68
P04436 AC104837.2-201ENST00000427236 424 ntBASIC4.58□□□□□ -1.68
P04436 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.58□□□□□ -1.68
P04436 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.58□□□□□ -1.68
P04436 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.58□□□□□ -1.68
P04436 RPL31P44-201ENST00000447680 377 ntBASIC4.58□□□□□ -1.68
P04436 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.58□□□□□ -1.68
P04436 RPL35AP28-201ENST00000459730 331 ntBASIC4.58□□□□□ -1.68
P04436 AC022336.1-201ENST00000475510 337 ntBASIC4.58□□□□□ -1.68
P04436 RPL7P16-201ENST00000479738 738 ntBASIC4.58□□□□□ -1.68
P04436 AC083982.1-201ENST00000485679 344 ntBASIC4.58□□□□□ -1.68
P04436 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.58□□□□□ -1.68
P04436 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.58□□□□□ -1.68
P04436 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.58□□□□□ -1.68
P04436 AC008676.3-201ENST00000521237 435 ntBASIC4.58□□□□□ -1.68
P04436 AC018442.3-201ENST00000523025 183 ntBASIC4.58□□□□□ -1.68
P04436 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.58□□□□□ -1.68
P04436 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
P04436 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.58□□□□□ -1.68
P04436 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.58□□□□□ -1.68
P04436 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.58□□□□□ -1.68
P04436 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.58□□□□□ -1.68
P04436 CD24P2-201ENST00000565486 219 ntBASIC4.58□□□□□ -1.68
P04436 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms