Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 SNORA17.1-201ENST00000362945 126 ntBASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 SNORD51.1-201ENST00000365405 77 ntBASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 HMGB3P7-201ENST00000400214 611 ntBASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 AL590762.4-201ENST00000425885 253 ntBASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 ZNF965P-201ENST00000432501 817 ntBASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 NPM1P18-201ENST00000434232 732 ntBASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 AC090018.1-201ENST00000434369 367 ntBASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 MED28P3-201ENST00000444288 531 ntBASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 AC104634.1-201ENST00000452720 462 ntBASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 AP000797.2-201ENST00000475768 606 ntBASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 AC037198.2-201ENST00000478845 733 ntBASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 COX6B1P2-201ENST00000489624 230 ntBASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 AC231760.1-201ENST00000498002 260 ntBASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 AC122134.1-201ENST00000565664 1104 ntBASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 MIR4646-201ENST00000580775 63 ntBASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 AC242628.1-201ENST00000606810 391 ntBASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 AC010632.3-201ENST00000611377 369 ntBASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 AC244107.2-201ENST00000611773 76 ntBASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 AP002799.1-201ENST00000623552 423 ntBASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 RPL23AP61-201ENST00000623642 466 ntBASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 AC138965.3-201ENST00000623875 498 ntBASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 AC021106.3-201ENST00000623925 531 ntBASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 NXF4-202ENST00000416098 1465 ntBASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 HSPA8P18-201ENST00000439846 1928 ntBASIC4.8□□□□□ -1.64
NPIPA3F8WFD2 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 AC006206.1-201ENST00000544842 3387 ntBASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 AP000542.2-201ENST00000623199 6179 ntBASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 CASC19-260ENST00000641828 2001 ntBASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 MIR550A3-201ENST00000390735 95 ntBASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 DBIP1-201ENST00000401435 260 ntBASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 SETP15-201ENST00000412724 337 ntBASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 AC073464.3-201ENST00000422564 712 ntBASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 AL390879.2-203ENST00000426943 1121 ntBASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 AC022022.1-201ENST00000430304 178 ntBASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 AL772161.1-201ENST00000439130 476 ntBASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 RPL7P61-201ENST00000451721 751 ntBASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 Z92846.1-201ENST00000456203 268 ntBASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 HSPE1P22-201ENST00000456856 327 ntBASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 SUMO1P1-201ENST00000497904 306 ntBASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 EIF3KP3-201ENST00000514461 639 ntBASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 RNA5SP373-201ENST00000517271 95 ntBASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 AC024940.3-201ENST00000538551 316 ntBASIC4.79□□□□□ -1.64
NPIPA3F8WFD2 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms