Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 ADAM5-202ENST00000399789 1942 ntBASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 RNU1-149P-201ENST00000390870 161 ntBASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 U3.25-201ENST00000391209 220 ntBASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 GSTA12P-201ENST00000402398 508 ntBASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 RPL5P19-201ENST00000404228 893 ntBASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 RN7SKP16-201ENST00000410180 299 ntBASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 AL160175.1-201ENST00000428124 247 ntBASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 AC090018.1-201ENST00000434369 367 ntBASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 USP9YP24-201ENST00000434374 697 ntBASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 RPL7AP61-201ENST00000443410 636 ntBASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 USP9YP17-201ENST00000444617 696 ntBASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 AL358794.1-201ENST00000445689 381 ntBASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 Z73417.1-201ENST00000447373 778 ntBASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 BX842559.2-201ENST00000451418 605 ntBASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 RPL21P47-201ENST00000483696 477 ntBASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 AC108693.1-201ENST00000496068 432 ntBASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 SUMO1P1-201ENST00000497904 306 ntBASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 MTND4LP2-201ENST00000502312 285 ntBASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 OR4U1P-201ENST00000554958 912 ntBASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 AC127381.1-201ENST00000555979 939 ntBASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 AC104229.1-201ENST00000561364 255 ntBASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 AC023824.3-201ENST00000569003 562 ntBASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 MIR4660-201ENST00000583549 74 ntBASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 AC113368.1-201ENST00000603736 382 ntBASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 AC093673.2-201ENST00000609674 331 ntBASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 AC015922.4-201ENST00000612568 690 ntBASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 U6.48-201ENST00000618523 106 ntBASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 AC006386.1-201ENST00000619436 415 ntBASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 AC011330.2-201ENST00000621680 635 ntBASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 AP002791.1-201ENST00000623291 381 ntBASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 CYP4F35P-202ENST00000636121 390 ntBASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 AC092747.4-201ENST00000620519 1861 ntBASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 BRAFP1-201ENST00000445336 2703 ntBASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.51□□□□□ -1.53
TCRBV5S1A1TA0A578 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
TCRBV5S1A1TA0A578 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.5□□□□□ -1.53
TCRBV5S1A1TA0A578 DMD-211ENST00000378707 7410 ntTSL 5 BASIC5.5□□□□□ -1.53
TCRBV5S1A1TA0A578 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
TCRBV5S1A1TA0A578 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TCRBV5S1A1TA0A578 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.5□□□□□ -1.53
TCRBV5S1A1TA0A578 RNU6-481P-201ENST00000384194 107 ntBASIC5.5□□□□□ -1.53
TCRBV5S1A1TA0A578 AP002784.2-201ENST00000397300 549 ntBASIC5.5□□□□□ -1.53
TCRBV5S1A1TA0A578 GAPDHP15-201ENST00000398586 975 ntBASIC5.5□□□□□ -1.53
TCRBV5S1A1TA0A578 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC5.5□□□□□ -1.53
TCRBV5S1A1TA0A578 AC107081.1-201ENST00000414975 361 ntBASIC5.5□□□□□ -1.53
TCRBV5S1A1TA0A578 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.5□□□□□ -1.53
TCRBV5S1A1TA0A578 AL121776.1-201ENST00000429337 372 ntBASIC5.5□□□□□ -1.53
TCRBV5S1A1TA0A578 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.5□□□□□ -1.53
TCRBV5S1A1TA0A578 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.5□□□□□ -1.53
TCRBV5S1A1TA0A578 AL391987.1-201ENST00000441025 200 ntBASIC5.5□□□□□ -1.53
TCRBV5S1A1TA0A578 VN1R25P-201ENST00000443385 738 ntBASIC5.5□□□□□ -1.53
TCRBV5S1A1TA0A578 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.5□□□□□ -1.53
TCRBV5S1A1TA0A578 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TCRBV5S1A1TA0A578 UBA52P7-201ENST00000486088 380 ntBASIC5.5□□□□□ -1.53
TCRBV5S1A1TA0A578 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.5□□□□□ -1.53
TCRBV5S1A1TA0A578 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.5□□□□□ -1.53
TCRBV5S1A1TA0A578 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.5□□□□□ -1.53
TCRBV5S1A1TA0A578 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC5.5□□□□□ -1.53
TCRBV5S1A1TA0A578 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.5□□□□□ -1.53
TCRBV5S1A1TA0A578 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.5□□□□□ -1.53
TCRBV5S1A1TA0A578 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.5□□□□□ -1.53
TCRBV5S1A1TA0A578 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
TCRBV5S1A1TA0A578 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms