Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 RPS3AP25-201ENST00000411660 793 ntBASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 NDUFA5P10-201ENST00000432147 357 ntBASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 RPS7P2-201ENST00000435134 607 ntBASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 PA2G4P6-201ENST00000438325 1197 ntBASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 TCEA1P3-201ENST00000443005 880 ntBASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 AC079168.1-201ENST00000458741 345 ntBASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 TPT1P3-201ENST00000492841 512 ntBASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 ASNSP4-201ENST00000511103 447 ntBASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 AL606834.3-201ENST00000602615 496 ntBASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 VN1R9P-201ENST00000614184 867 ntBASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 AL669942.2-201ENST00000620352 697 ntBASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 RN7SKP124-201ENST00000364730 341 ntBASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 RNU1-77P-201ENST00000390868 162 ntBASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 AP002784.2-201ENST00000397300 549 ntBASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 U3.32-201ENST00000408116 212 ntBASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 RNA5SP487-201ENST00000410186 122 ntBASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 AC211486.3-201ENST00000412694 621 ntBASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 PNRC2P1-201ENST00000423940 420 ntBASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 MTATP6P17-201ENST00000431030 672 ntBASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 BX842559.2-201ENST00000451418 605 ntBASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 HMGB1P5-202ENST00000451497 985 ntBASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 RN7SL51P-201ENST00000468230 285 ntBASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 RN7SL189P-201ENST00000468631 289 ntBASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 SUMO2P5-201ENST00000506790 245 ntBASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 AC006427.1-201ENST00000514359 712 ntBASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 RNU6-941P-201ENST00000516346 108 ntBASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 AC021451.1-201ENST00000523498 1129 ntBASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 DUX4L52-201ENST00000549363 777 ntBASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 SNX6P1-201ENST00000601728 1224 ntBASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 OR7A19P-201ENST00000608051 733 ntBASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 AC245100.7-201ENST00000609678 442 ntBASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 AC108359.1-201ENST00000616451 1211 ntBASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 CYCSP41-201ENST00000616920 296 ntBASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 AL158062.1-201ENST00000619632 745 ntBASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 AL109659.3-201ENST00000624985 950 ntBASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 AC007342.7-201ENST00000624610 2337 ntBASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
TCRBV7S3A2A0A539 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms