Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.84□□□□□ -1.48
PCDHB1Q9Y5F3 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
PCDHB1Q9Y5F3 MAPK10-261ENST00000641050 3109 ntBASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 OR9K1P-201ENST00000326513 941 ntBASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 SNORD116-2-201ENST00000384274 95 ntBASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 Y_RNA.472-201ENST00000384322 102 ntBASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 SNORD116-6-201ENST00000384711 96 ntBASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 AC104297.1-201ENST00000393779 870 ntBASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 HMGB3P18-201ENST00000406327 590 ntBASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 AC013404.1-201ENST00000413068 249 ntBASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 AL122001.1-201ENST00000457027 370 ntBASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 RPL23AP44-201ENST00000482216 473 ntBASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 AC034244.1-201ENST00000507687 207 ntBASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 AC104108.1-201ENST00000509930 412 ntBASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 PRELID3BP4-201ENST00000515476 571 ntBASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 CYCSP22-201ENST00000517555 339 ntBASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 AC078899.1-201ENST00000521432 1185 ntBASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 MTCYBP27-201ENST00000555160 670 ntBASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 AC090695.1-201ENST00000561269 1222 ntBASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 AC146944.4-201ENST00000602697 718 ntBASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 AC125494.3-201ENST00000602759 455 ntBASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 AL020997.3-201ENST00000602843 359 ntBASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 AC002069.2-201ENST00000603580 883 ntBASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 AC007349.4-201ENST00000608114 532 ntBASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 AL445423.1-201ENST00000609941 536 ntBASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 AC026422.1-201ENST00000623961 452 ntBASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 AC027088.4-201ENST00000611559 1947 ntBASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 AC123769.1-201ENST00000530992 3192 ntBASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB1Q9Y5F3 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 AC007996.1-201ENST00000620414 2821 ntBASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 MIR375-201ENST00000362103 64 ntBASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 RNA5SP514-201ENST00000363717 111 ntBASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 RN7SKP160-201ENST00000363804 340 ntBASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 RPL11P3-201ENST00000395256 523 ntBASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 OR2W4P-201ENST00000406496 926 ntBASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 AC093155.2-201ENST00000420734 937 ntBASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 AL355433.1-201ENST00000422804 300 ntBASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms