Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 VN1R48P-201ENST00000448149 1036 ntBASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 AL389915.2-201ENST00000454576 441 ntBASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 OR5M14P-201ENST00000506803 618 ntBASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 AC022832.1-201ENST00000530718 645 ntBASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 MIR4675-201ENST00000577898 77 ntBASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 SNX6P1-201ENST00000601728 1224 ntBASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 HMGB1P51-201ENST00000605166 638 ntBASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 AL139407.1-201ENST00000613826 1175 ntBASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 RPSAP73-201ENST00000614820 330 ntBASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 AC105105.5-201ENST00000622635 1294 ntBASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 RBPJP2-201ENST00000618187 1444 ntBASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4BQ9Y4P1 ADAM5-202ENST00000399789 1942 ntBASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 AC027228.2-201ENST00000567141 2154 ntBASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 RPL23P2-201ENST00000320371 421 ntBASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 RNA5SP507-201ENST00000363603 121 ntBASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 U8.4-201ENST00000363626 134 ntBASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 AL035079.1-201ENST00000405210 287 ntBASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 EIF2S2P4-201ENST00000461070 984 ntBASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 RPS18P6-201ENST00000476880 458 ntBASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 MYL12BP2-201ENST00000503948 512 ntBASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 SNRPCP2-201ENST00000504370 475 ntBASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 AC044860.2-201ENST00000561005 179 ntBASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 BX322635.1-201ENST00000605804 496 ntBASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 AC099494.2-201ENST00000623371 978 ntBASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 AC092159.4-201ENST00000624944 550 ntBASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 AC119674.1-220ENST00000641502 1048 ntBASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 AC092376.2-201ENST00000622621 4116 ntBASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.85□□□□□ -1.63
ATG4BQ9Y4P1 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ATG4BQ9Y4P1 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms