Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
FOXP3Q9BZS1 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
FOXP3Q9BZS1 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.48□□□□□ -1.37
FOXP3Q9BZS1 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.48□□□□□ -1.37
FOXP3Q9BZS1 AC111152.1-202ENST00000635848 339 ntBASIC6.48□□□□□ -1.37
FOXP3Q9BZS1 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.48□□□□□ -1.37
FOXP3Q9BZS1 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC6.48□□□□□ -1.37
FOXP3Q9BZS1 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
FOXP3Q9BZS1 AL355852.1-201ENST00000454081 1771 ntBASIC6.48□□□□□ -1.37
FOXP3Q9BZS1 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
FOXP3Q9BZS1 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.48□□□□□ -1.37
FOXP3Q9BZS1 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
FOXP3Q9BZS1 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.48□□□□□ -1.37
FOXP3Q9BZS1 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
FOXP3Q9BZS1 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.48□□□□□ -1.37
FOXP3Q9BZS1 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
FOXP3Q9BZS1 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.48□□□□□ -1.37
FOXP3Q9BZS1 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC6.48□□□□□ -1.37
FOXP3Q9BZS1 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
FOXP3Q9BZS1 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.48□□□□□ -1.37
FOXP3Q9BZS1 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 AL359976.1-201ENST00000418655 3528 ntBASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 AC073055.1-201ENST00000456901 1621 ntBASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 Y_RNA.41-201ENST00000362646 102 ntBASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 SNORD16-201ENST00000362803 99 ntBASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 AL121977.1-201ENST00000401636 979 ntBASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 PRELID1P1-201ENST00000403549 660 ntBASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 AL096800.1-201ENST00000405326 893 ntBASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 RANP6-201ENST00000413691 644 ntBASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 RPL21P43-201ENST00000425440 472 ntBASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 AL590103.1-201ENST00000434488 307 ntBASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 RPL12P11-201ENST00000439970 501 ntBASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 COL11A2P1-205ENST00000441798 676 ntBASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 AC023512.1-201ENST00000444513 499 ntBASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 RPL21P134-201ENST00000453468 483 ntBASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 CDC42P1-201ENST00000456658 548 ntBASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 RPL5P13-201ENST00000462840 709 ntBASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 AC021006.1-201ENST00000489849 553 ntBASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 UGT2A3P7-201ENST00000510485 734 ntBASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 AC026782.2-201ENST00000510845 636 ntBASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 IGKV2-19-201ENST00000518132 283 ntBASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 OR5AZ1P-201ENST00000527448 943 ntBASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 AC245505.1-201ENST00000556398 224 ntBASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 AC079171.1-201ENST00000568788 914 ntBASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 NPIPB1P-202ENST00000588786 828 ntBASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 AP001267.4-201ENST00000602598 545 ntBASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 MTCYBP22-201ENST00000603788 447 ntBASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 AC128687.1-201ENST00000605304 619 ntBASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 AL109618.2-201ENST00000605527 211 ntBASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 AC006270.3-201ENST00000605967 1036 ntBASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 SNORD96A-201ENST00000606577 79 ntBASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 AC116651.1-201ENST00000609724 556 ntBASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 AL365181.4-201ENST00000609800 547 ntBASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 AC097505.1-201ENST00000610199 565 ntBASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 MIR6721-201ENST00000617181 87 ntBASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 AL355480.1-201ENST00000629041 99 ntBASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 AC004520.1-201ENST00000608362 1413 ntBASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 AL137100.1-201ENST00000556703 1620 ntBASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
FOXP3Q9BZS1 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
FOXP3Q9BZS1 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
FOXP3Q9BZS1 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
FOXP3Q9BZS1 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms