Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMGB4Q8WW32 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.53□□□□□ -1.52
HMGB4Q8WW32 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HMGB4Q8WW32 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.53□□□□□ -1.52
HMGB4Q8WW32 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.53□□□□□ -1.52
HMGB4Q8WW32 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.53□□□□□ -1.52
HMGB4Q8WW32 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMGB4Q8WW32 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.53□□□□□ -1.52
HMGB4Q8WW32 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
HMGB4Q8WW32 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMGB4Q8WW32 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMGB4Q8WW32 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.52□□□□□ -1.53
HMGB4Q8WW32 AL627171.1-201ENST00000618845 1308 ntBASIC5.52□□□□□ -1.53
HMGB4Q8WW32 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMGB4Q8WW32 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.52□□□□□ -1.53
HMGB4Q8WW32 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMGB4Q8WW32 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.52□□□□□ -1.53
HMGB4Q8WW32 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HMGB4Q8WW32 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMGB4Q8WW32 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
HMGB4Q8WW32 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HMGB4Q8WW32 RNU5E-10P-201ENST00000363506 118 ntBASIC5.52□□□□□ -1.53
HMGB4Q8WW32 RNU1-59P-201ENST00000364829 162 ntBASIC5.52□□□□□ -1.53
HMGB4Q8WW32 RNU4-31P-201ENST00000384211 141 ntBASIC5.52□□□□□ -1.53
HMGB4Q8WW32 DUTP5-201ENST00000406790 469 ntBASIC5.52□□□□□ -1.53
HMGB4Q8WW32 Y_RNA.625-201ENST00000411256 107 ntBASIC5.52□□□□□ -1.53
HMGB4Q8WW32 RPL37P18-201ENST00000411602 243 ntBASIC5.52□□□□□ -1.53
HMGB4Q8WW32 MTCO2P8-201ENST00000412213 658 ntBASIC5.52□□□□□ -1.53
HMGB4Q8WW32 LINC01347-201ENST00000417964 355 ntBASIC5.52□□□□□ -1.53
HMGB4Q8WW32 EIF4A1P1-201ENST00000420241 934 ntBASIC5.52□□□□□ -1.53
HMGB4Q8WW32 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC5.52□□□□□ -1.53
HMGB4Q8WW32 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.52□□□□□ -1.53
HMGB4Q8WW32 TMEM183AP1-205ENST00000432739 290 ntBASIC5.52□□□□□ -1.53
HMGB4Q8WW32 AC092447.2-201ENST00000435487 669 ntBASIC5.52□□□□□ -1.53
HMGB4Q8WW32 FABP5P3-201ENST00000437960 408 ntBASIC5.52□□□□□ -1.53
HMGB4Q8WW32 ARF4P4-201ENST00000439608 520 ntBASIC5.52□□□□□ -1.53
HMGB4Q8WW32 MED6P1-201ENST00000439659 713 ntBASIC5.52□□□□□ -1.53
HMGB4Q8WW32 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.52□□□□□ -1.53
HMGB4Q8WW32 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.52□□□□□ -1.53
HMGB4Q8WW32 AL389915.2-201ENST00000454576 441 ntBASIC5.52□□□□□ -1.53
HMGB4Q8WW32 AC107015.1-201ENST00000466902 747 ntBASIC5.52□□□□□ -1.53
HMGB4Q8WW32 AC037198.2-201ENST00000478845 733 ntBASIC5.52□□□□□ -1.53
HMGB4Q8WW32 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.52□□□□□ -1.53
HMGB4Q8WW32 HAUS1P1-201ENST00000505275 832 ntBASIC5.52□□□□□ -1.53
HMGB4Q8WW32 NDUFB5P1-201ENST00000508134 564 ntBASIC5.52□□□□□ -1.53
HMGB4Q8WW32 ASNSP4-201ENST00000511103 447 ntBASIC5.52□□□□□ -1.53
HMGB4Q8WW32 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.52□□□□□ -1.53
HMGB4Q8WW32 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.52□□□□□ -1.53
HMGB4Q8WW32 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.52□□□□□ -1.53
HMGB4Q8WW32 AP003717.3-201ENST00000544832 1180 ntBASIC5.52□□□□□ -1.53
HMGB4Q8WW32 AL049830.4-201ENST00000555149 351 ntBASIC5.52□□□□□ -1.53
HMGB4Q8WW32 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
HMGB4Q8WW32 AL109741.3-201ENST00000561748 592 ntBASIC5.52□□□□□ -1.53
HMGB4Q8WW32 AL049838.1-201ENST00000563647 981 ntBASIC5.52□□□□□ -1.53
HMGB4Q8WW32 RPL10P14-201ENST00000565265 298 ntBASIC5.52□□□□□ -1.53
HMGB4Q8WW32 AC010735.1-201ENST00000567305 1026 ntBASIC5.52□□□□□ -1.53
HMGB4Q8WW32 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.52□□□□□ -1.53
HMGB4Q8WW32 AL606834.3-201ENST00000602615 496 ntBASIC5.52□□□□□ -1.53
HMGB4Q8WW32 AL049844.2-201ENST00000604280 628 ntBASIC5.52□□□□□ -1.53
HMGB4Q8WW32 AC099785.1-201ENST00000605697 437 ntBASIC5.52□□□□□ -1.53
HMGB4Q8WW32 AC011374.2-201ENST00000607135 526 ntBASIC5.52□□□□□ -1.53
HMGB4Q8WW32 AL133481.2-203ENST00000607558 139 ntBASIC5.52□□□□□ -1.53
HMGB4Q8WW32 AC133644.2-201ENST00000608142 540 ntBASIC5.52□□□□□ -1.53
HMGB4Q8WW32 U1.25-201ENST00000614085 162 ntBASIC5.52□□□□□ -1.53
HMGB4Q8WW32 AC109583.2-201ENST00000617367 129 ntBASIC5.52□□□□□ -1.53
HMGB4Q8WW32 U1.31-201ENST00000620022 160 ntBASIC5.52□□□□□ -1.53
HMGB4Q8WW32 AC010435.1-201ENST00000623353 1177 ntBASIC5.52□□□□□ -1.53
HMGB4Q8WW32 CYP4F35P-202ENST00000636121 390 ntBASIC5.52□□□□□ -1.53
HMGB4Q8WW32 AC083865.1-201ENST00000636634 831 ntBASIC5.52□□□□□ -1.53
HMGB4Q8WW32 AC009452.1-201ENST00000640823 606 ntBASIC5.52□□□□□ -1.53
HMGB4Q8WW32 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
HMGB4Q8WW32 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HMGB4Q8WW32 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMGB4Q8WW32 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.52□□□□□ -1.53
HMGB4Q8WW32 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
HMGB4Q8WW32 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMGB4Q8WW32 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMGB4Q8WW32 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
HMGB4Q8WW32 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMGB4Q8WW32 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HMGB4Q8WW32 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
HMGB4Q8WW32 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.52□□□□□ -1.53
HMGB4Q8WW32 AC133552.1-201ENST00000569988 4007 ntBASIC5.51□□□□□ -1.53
HMGB4Q8WW32 MSL3P1-202ENST00000440028 1468 ntBASIC5.51□□□□□ -1.53
HMGB4Q8WW32 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMGB4Q8WW32 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMGB4Q8WW32 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMGB4Q8WW32 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMGB4Q8WW32 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMGB4Q8WW32 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMGB4Q8WW32 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HMGB4Q8WW32 RN7SKP115-201ENST00000363177 317 ntBASIC5.51□□□□□ -1.53
HMGB4Q8WW32 RN7SKP103-201ENST00000363848 320 ntBASIC5.51□□□□□ -1.53
HMGB4Q8WW32 RPL5P19-201ENST00000404228 893 ntBASIC5.51□□□□□ -1.53
HMGB4Q8WW32 AL034374.1-201ENST00000406329 351 ntBASIC5.51□□□□□ -1.53
HMGB4Q8WW32 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.51□□□□□ -1.53
HMGB4Q8WW32 AL139128.1-201ENST00000413921 941 ntBASIC5.51□□□□□ -1.53
HMGB4Q8WW32 RPS26P38-201ENST00000414476 348 ntBASIC5.51□□□□□ -1.53
HMGB4Q8WW32 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.51□□□□□ -1.53
HMGB4Q8WW32 MTCO2P23-201ENST00000425216 680 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms