Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AK3P5-201ENST00000432033 519 ntBASIC1.52□□□□□ -2.17
SYNE1Q8NF91 AC073648.4-201ENST00000442655 781 ntBASIC1.52□□□□□ -2.17
SYNE1Q8NF91 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC1.52□□□□□ -2.17
SYNE1Q8NF91 ENPP7P11-201ENST00000505915 627 ntBASIC1.52□□□□□ -2.17
SYNE1Q8NF91 IGKV2D-10-201ENST00000520194 281 ntBASIC1.52□□□□□ -2.17
SYNE1Q8NF91 AC005377.1-201ENST00000605126 456 ntBASIC1.52□□□□□ -2.17
SYNE1Q8NF91 BNIP3P19-201ENST00000605397 577 ntBASIC1.52□□□□□ -2.17
SYNE1Q8NF91 AC067931.1-201ENST00000624190 671 ntBASIC1.52□□□□□ -2.17
SYNE1Q8NF91 AC000095.2-202ENST00000637415 154 ntBASIC1.52□□□□□ -2.17
SYNE1Q8NF91 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
SYNE1Q8NF91 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC1.52□□□□□ -2.17
SYNE1Q8NF91 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
SYNE1Q8NF91 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC1.52□□□□□ -2.17
SYNE1Q8NF91 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC1.52□□□□□ -2.17
SYNE1Q8NF91 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
SYNE1Q8NF91 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC1.52□□□□□ -2.17
SYNE1Q8NF91 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC1.52□□□□□ -2.17
SYNE1Q8NF91 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
SYNE1Q8NF91 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
SYNE1Q8NF91 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
SYNE1Q8NF91 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
SYNE1Q8NF91 TMBIM7P-201ENST00000418074 855 ntBASIC1.52□□□□□ -2.17
SYNE1Q8NF91 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC1.52□□□□□ -2.17
SYNE1Q8NF91 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC1.52□□□□□ -2.17
SYNE1Q8NF91 BX679664.2-201ENST00000439282 283 ntBASIC1.52□□□□□ -2.17
SYNE1Q8NF91 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
SYNE1Q8NF91 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC1.52□□□□□ -2.17
SYNE1Q8NF91 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC1.52□□□□□ -2.17
SYNE1Q8NF91 AC079064.1-201ENST00000528365 362 ntBASIC1.52□□□□□ -2.17
SYNE1Q8NF91 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC1.52□□□□□ -2.17
SYNE1Q8NF91 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
SYNE1Q8NF91 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
SYNE1Q8NF91 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC1.52□□□□□ -2.17
SYNE1Q8NF91 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
SYNE1Q8NF91 RNA5SP428-201ENST00000365129 132 ntBASIC1.52□□□□□ -2.17
SYNE1Q8NF91 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
SYNE1Q8NF91 AC023141.6-201ENST00000429418 337 ntBASIC1.52□□□□□ -2.17
SYNE1Q8NF91 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC1.52□□□□□ -2.17
SYNE1Q8NF91 AC111000.3-201ENST00000508057 576 ntBASIC1.52□□□□□ -2.17
SYNE1Q8NF91 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC1.52□□□□□ -2.17
SYNE1Q8NF91 HNRNPRP2-201ENST00000528421 743 ntBASIC1.52□□□□□ -2.17
SYNE1Q8NF91 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC1.52□□□□□ -2.17
SYNE1Q8NF91 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC1.52□□□□□ -2.17
SYNE1Q8NF91 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
SYNE1Q8NF91 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC1.52□□□□□ -2.17
SYNE1Q8NF91 AL137100.1-201ENST00000556703 1620 ntBASIC1.52□□□□□ -2.17
SYNE1Q8NF91 AC068254.2-201ENST00000623938 3577 ntBASIC1.52□□□□□ -2.17
SYNE1Q8NF91 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
SYNE1Q8NF91 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC1.52□□□□□ -2.17
SYNE1Q8NF91 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC1.52□□□□□ -2.17
SYNE1Q8NF91 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC1.52□□□□□ -2.17
SYNE1Q8NF91 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
SYNE1Q8NF91 SNORA5.1-201ENST00000384275 131 ntBASIC1.52□□□□□ -2.17
SYNE1Q8NF91 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
SYNE1Q8NF91 ST13P16-201ENST00000401760 781 ntBASIC1.52□□□□□ -2.17
SYNE1Q8NF91 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC1.52□□□□□ -2.17
SYNE1Q8NF91 PCA3_2.1-201ENST00000612507 409 ntBASIC1.52□□□□□ -2.17
SYNE1Q8NF91 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC1.52□□□□□ -2.17
SYNE1Q8NF91 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
SYNE1Q8NF91 DHX40P1-201ENST00000588725 1412 ntBASIC1.51□□□□□ -2.17
SYNE1Q8NF91 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SYNE1Q8NF91 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC1.51□□□□□ -2.17
SYNE1Q8NF91 RPL7P41-201ENST00000485823 957 ntBASIC1.51□□□□□ -2.17
SYNE1Q8NF91 OR4A2P-201ENST00000527276 913 ntBASIC1.51□□□□□ -2.17
SYNE1Q8NF91 AC084824.2-201ENST00000548906 345 ntBASIC1.51□□□□□ -2.17
SYNE1Q8NF91 AC098935.2-201ENST00000604222 466 ntBASIC1.51□□□□□ -2.17
SYNE1Q8NF91 SSX9-202ENST00000608568 580 ntTSL 4 BASIC1.51□□□□□ -2.17
SYNE1Q8NF91 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC1.51□□□□□ -2.17
SYNE1Q8NF91 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SYNE1Q8NF91 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SYNE1Q8NF91 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC1.51□□□□□ -2.17
SYNE1Q8NF91 WAC-209ENST00000428935 1320 ntTSL 2 BASIC1.51□□□□□ -2.17
SYNE1Q8NF91 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
SYNE1Q8NF91 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
SYNE1Q8NF91 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
SYNE1Q8NF91 RIMKLBP2-201ENST00000424737 654 ntBASIC1.51□□□□□ -2.17
SYNE1Q8NF91 FHP1-201ENST00000442741 703 ntBASIC1.51□□□□□ -2.17
SYNE1Q8NF91 HMGB1P4-201ENST00000455362 567 ntBASIC1.51□□□□□ -2.17
SYNE1Q8NF91 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC1.51□□□□□ -2.17
SYNE1Q8NF91 snoU109.5-201ENST00000516231 132 ntBASIC1.51□□□□□ -2.17
SYNE1Q8NF91 CYCSP29-201ENST00000533731 318 ntBASIC1.51□□□□□ -2.17
SYNE1Q8NF91 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC1.51□□□□□ -2.17
SYNE1Q8NF91 XIST-210ENST00000602863 775 ntTSL 3 BASIC1.51□□□□□ -2.17
SYNE1Q8NF91 AC009027.1-201ENST00000604510 479 ntBASIC1.51□□□□□ -2.17
SYNE1Q8NF91 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
SYNE1Q8NF91 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC1.51□□□□□ -2.17
SYNE1Q8NF91 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SYNE1Q8NF91 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC1.51□□□□□ -2.17
SYNE1Q8NF91 AC006484.1-201ENST00000435086 1884 ntBASIC1.51□□□□□ -2.17
SYNE1Q8NF91 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
SYNE1Q8NF91 AC079741.1-201ENST00000321498 212 ntBASIC1.51□□□□□ -2.17
SYNE1Q8NF91 RN7SKP16-201ENST00000410180 299 ntBASIC1.51□□□□□ -2.17
SYNE1Q8NF91 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC1.51□□□□□ -2.17
SYNE1Q8NF91 IMPA1P1-201ENST00000510718 842 ntBASIC1.51□□□□□ -2.17
SYNE1Q8NF91 RN7SKP147-201ENST00000517154 244 ntBASIC1.51□□□□□ -2.17
SYNE1Q8NF91 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC1.51□□□□□ -2.17
SYNE1Q8NF91 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
SYNE1Q8NF91 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
SYNE1Q8NF91 AC022726.1-201ENST00000587475 207 ntBASIC1.51□□□□□ -2.17
SYNE1Q8NF91 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms