Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 AC002553.3-201ENST00000453002 341 ntBASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 Z83838.1-202ENST00000456225 839 ntBASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 AL024509.2-201ENST00000493462 493 ntBASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 CCDC11P1-201ENST00000503137 1162 ntBASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 OR7E99P-201ENST00000505750 922 ntBASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 RN7SKP35-201ENST00000517210 151 ntBASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 AP001858.2-201ENST00000536213 601 ntBASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 AC092747.2-201ENST00000545069 983 ntBASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 AC092332.1-201ENST00000563684 829 ntBASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 AP003465.2-201ENST00000602571 373 ntBASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 AC125494.3-201ENST00000602759 455 ntBASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 AC067773.1-201ENST00000603284 1094 ntBASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 AL021368.3-201ENST00000607119 578 ntBASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 AC092266.1-201ENST00000610958 165 ntBASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 AL512652.1-201ENST00000619006 500 ntBASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 AC009878.1-201ENST00000621819 340 ntBASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 AC087821.2-201ENST00000637086 450 ntBASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 AC092724.1-201ENST00000624623 3397 ntBASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM48Q8IWZ4 LYARP1-201ENST00000436977 1501 ntBASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 BIN2P1-201ENST00000504996 1530 ntBASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 AL731556.1-201ENST00000394628 3711 ntBASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 AC092646.2-201ENST00000431242 2095 ntBASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 AL391994.1-201ENST00000254724 282 ntBASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 ENSAP3-201ENST00000312710 333 ntBASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 RNU1-134P-201ENST00000362935 165 ntBASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 RNU6-707P-201ENST00000364647 95 ntBASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 OR1L1-202ENST00000373686 1083 ntBASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 SNORA70H-201ENST00000383910 135 ntBASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 SNORA70J-201ENST00000384182 135 ntBASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 AC004386.1-201ENST00000393214 761 ntBASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 OR2W4P-201ENST00000406496 926 ntBASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 MTCYBP5-201ENST00000423752 1135 ntBASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 PNKDP1-201ENST00000435914 430 ntBASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 RPS24P1-201ENST00000438550 371 ntBASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 TPMTP4-201ENST00000450749 678 ntBASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 RPL7P18-201ENST00000478965 734 ntBASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 AC112198.1-201ENST00000505369 1220 ntBASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 RNU6-720P-201ENST00000516363 108 ntBASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 OR4A6P-201ENST00000534364 970 ntBASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 YWHABP2-201ENST00000540201 713 ntBASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM48Q8IWZ4 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms