Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.05□□□□□ -1.6
CDKL3Q8IVW4 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDKL3Q8IVW4 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CDKL3Q8IVW4 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CDKL3Q8IVW4 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.05□□□□□ -1.6
CDKL3Q8IVW4 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CDKL3Q8IVW4 CKS1BP6-201ENST00000424932 240 ntBASIC5.05□□□□□ -1.6
CDKL3Q8IVW4 AL137845.2-201ENST00000444292 988 ntBASIC5.05□□□□□ -1.6
CDKL3Q8IVW4 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.05□□□□□ -1.6
CDKL3Q8IVW4 AL031584.1-201ENST00000447169 754 ntBASIC5.05□□□□□ -1.6
CDKL3Q8IVW4 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.05□□□□□ -1.6
CDKL3Q8IVW4 AC020890.1-201ENST00000491837 504 ntBASIC5.05□□□□□ -1.6
CDKL3Q8IVW4 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.05□□□□□ -1.6
CDKL3Q8IVW4 SCARNA21.2-201ENST00000516600 166 ntBASIC5.05□□□□□ -1.6
CDKL3Q8IVW4 AC026688.1-201ENST00000520639 1168 ntBASIC5.05□□□□□ -1.6
CDKL3Q8IVW4 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.05□□□□□ -1.6
CDKL3Q8IVW4 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.05□□□□□ -1.6
CDKL3Q8IVW4 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.05□□□□□ -1.6
CDKL3Q8IVW4 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.05□□□□□ -1.6
CDKL3Q8IVW4 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.05□□□□□ -1.6
CDKL3Q8IVW4 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDKL3Q8IVW4 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.05□□□□□ -1.6
CDKL3Q8IVW4 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.05□□□□□ -1.6
CDKL3Q8IVW4 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.05□□□□□ -1.6
CDKL3Q8IVW4 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.05□□□□□ -1.6
CDKL3Q8IVW4 AL137072.1-201ENST00000603444 466 ntBASIC5.05□□□□□ -1.6
CDKL3Q8IVW4 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.05□□□□□ -1.6
CDKL3Q8IVW4 AC022467.1-201ENST00000614738 749 ntBASIC5.05□□□□□ -1.6
CDKL3Q8IVW4 MIR6886-201ENST00000619864 61 ntBASIC5.05□□□□□ -1.6
CDKL3Q8IVW4 AC012414.7-202ENST00000622705 1090 ntBASIC5.05□□□□□ -1.6
CDKL3Q8IVW4 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.05□□□□□ -1.6
CDKL3Q8IVW4 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDKL3Q8IVW4 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CDKL3Q8IVW4 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
CDKL3Q8IVW4 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.05□□□□□ -1.6
CDKL3Q8IVW4 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CDKL3Q8IVW4 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDKL3Q8IVW4 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDKL3Q8IVW4 AC008758.3-201ENST00000507003 1829 ntBASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 AL034370.1-201ENST00000397254 1590 ntBASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 RNA5SP428-201ENST00000365129 132 ntBASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 AF186996.5-201ENST00000418098 904 ntBASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 AL163193.1-201ENST00000444895 788 ntBASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 RHEBP2-201ENST00000450289 600 ntBASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 AC090114.3-201ENST00000479267 829 ntBASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 AC116562.1-201ENST00000485355 781 ntBASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 RN7SL97P-201ENST00000486780 299 ntBASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 RNU6-513P-201ENST00000516104 104 ntBASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 SNORA74C-1-201ENST00000580726 201 ntBASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 MIR4691-201ENST00000583764 85 ntBASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 MIR3936-201ENST00000584304 110 ntBASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 SUMO2P15-201ENST00000604285 278 ntBASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 BX323046.1-201ENST00000610145 535 ntBASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 MIR8069-1-201ENST00000616627 86 ntBASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 MIR8069-2-201ENST00000621412 86 ntBASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 AC243960.7-201ENST00000623532 707 ntBASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 AL353662.3-201ENST00000625131 237 ntBASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 DHX9P1-201ENST00000436565 3076 ntBASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 CASC19-206ENST00000641028 1430 ntBASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDKL3Q8IVW4 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 MTCO1P11-201ENST00000429111 1528 ntBASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 AL359922.3-201ENST00000624779 1670 ntBASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 RPL23P2-201ENST00000320371 421 ntBASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 RNU6-171P-201ENST00000384354 107 ntBASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 AL357515.1-201ENST00000402967 542 ntBASIC5.03□□□□□ -1.6
CDKL3Q8IVW4 RN7SKP229-201ENST00000410465 302 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms