Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 TMSB4XP2-201ENST00000335179 210 ntBASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 Y_RNA.315-201ENST00000365117 102 ntBASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 AL672167.2-201ENST00000377164 879 ntBASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 VIM2P-201ENST00000402383 1294 ntBASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 SUMO2P13-201ENST00000403109 272 ntBASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 SOD1P1-201ENST00000407803 440 ntBASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 SKP1P3-201ENST00000429280 487 ntBASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 AC236972.2-201ENST00000434979 310 ntBASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 AC016691.1-201ENST00000441321 413 ntBASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 AC104306.1-201ENST00000449702 371 ntBASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 DNAJB5P1-201ENST00000454004 806 ntBASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 RPLP0P1-201ENST00000457002 361 ntBASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 AC099521.1-201ENST00000482557 334 ntBASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 RPS20-202ENST00000518875 671 ntTSL 2 BASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 OR7E161P-201ENST00000533722 967 ntBASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 AC025260.1-201ENST00000548858 430 ntBASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 RPL21P5-201ENST00000554662 472 ntBASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 AC019322.1-201ENST00000571869 389 ntBASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 AC011840.5-201ENST00000582125 771 ntBASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 PRR13P5-201ENST00000596581 442 ntBASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 AC024085.1-201ENST00000604299 432 ntBASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 AC004853.1-201ENST00000604902 698 ntBASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 AC243725.1-201ENST00000637164 436 ntBASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 JAML-213ENST00000640745 951 ntTSL 5 BASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.15□□□□□ -1.26
LYSMD3Q7Z3D4 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC7.15□□□□□ -1.27
LYSMD3Q7Z3D4 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
LYSMD3Q7Z3D4 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.15□□□□□ -1.27
LYSMD3Q7Z3D4 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.15□□□□□ -1.27
LYSMD3Q7Z3D4 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
LYSMD3Q7Z3D4 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC7.15□□□□□ -1.27
LYSMD3Q7Z3D4 AL118496.1-201ENST00000440201 1812 ntBASIC7.15□□□□□ -1.27
LYSMD3Q7Z3D4 DDX18P6-201ENST00000450119 1997 ntBASIC7.15□□□□□ -1.27
LYSMD3Q7Z3D4 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.15□□□□□ -1.27
LYSMD3Q7Z3D4 AC021242.1-201ENST00000507315 2035 ntBASIC7.15□□□□□ -1.27
LYSMD3Q7Z3D4 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.15□□□□□ -1.27
LYSMD3Q7Z3D4 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.15□□□□□ -1.27
LYSMD3Q7Z3D4 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
LYSMD3Q7Z3D4 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
LYSMD3Q7Z3D4 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
LYSMD3Q7Z3D4 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
LYSMD3Q7Z3D4 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC7.14□□□□□ -1.27
LYSMD3Q7Z3D4 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
LYSMD3Q7Z3D4 AC012213.2-201ENST00000562917 4597 ntBASIC7.14□□□□□ -1.27
LYSMD3Q7Z3D4 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC7.14□□□□□ -1.27
LYSMD3Q7Z3D4 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
LYSMD3Q7Z3D4 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
LYSMD3Q7Z3D4 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
LYSMD3Q7Z3D4 Y_RNA.157-201ENST00000363638 102 ntBASIC7.14□□□□□ -1.27
LYSMD3Q7Z3D4 SNORA70.5-201ENST00000365519 135 ntBASIC7.14□□□□□ -1.27
LYSMD3Q7Z3D4 Y_RNA.401-201ENST00000383965 117 ntBASIC7.14□□□□□ -1.27
LYSMD3Q7Z3D4 Y_RNA.474-201ENST00000384341 102 ntBASIC7.14□□□□□ -1.27
LYSMD3Q7Z3D4 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.14□□□□□ -1.27
LYSMD3Q7Z3D4 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
LYSMD3Q7Z3D4 PEX12P1-201ENST00000400284 1048 ntBASIC7.14□□□□□ -1.27
LYSMD3Q7Z3D4 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
LYSMD3Q7Z3D4 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
LYSMD3Q7Z3D4 SNORA11D-201ENST00000408548 128 ntBASIC7.14□□□□□ -1.27
LYSMD3Q7Z3D4 SNORA11E-201ENST00000408778 128 ntBASIC7.14□□□□□ -1.27
LYSMD3Q7Z3D4 RN7SKP254-201ENST00000410685 310 ntBASIC7.14□□□□□ -1.27
LYSMD3Q7Z3D4 AC092745.2-202ENST00000411880 369 ntBASIC7.14□□□□□ -1.27
LYSMD3Q7Z3D4 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC7.14□□□□□ -1.27
LYSMD3Q7Z3D4 AC244452.1-201ENST00000413798 141 ntBASIC7.14□□□□□ -1.27
LYSMD3Q7Z3D4 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC7.14□□□□□ -1.27
LYSMD3Q7Z3D4 RPL17P17-201ENST00000419491 557 ntBASIC7.14□□□□□ -1.27
LYSMD3Q7Z3D4 AL359633.1-201ENST00000421403 310 ntBASIC7.14□□□□□ -1.27
LYSMD3Q7Z3D4 MTCO2P5-201ENST00000422621 426 ntBASIC7.14□□□□□ -1.27
LYSMD3Q7Z3D4 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC7.14□□□□□ -1.27
LYSMD3Q7Z3D4 UQCRHP1-204ENST00000424609 274 ntBASIC7.14□□□□□ -1.27
LYSMD3Q7Z3D4 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC7.14□□□□□ -1.27
LYSMD3Q7Z3D4 ISCA1P6-201ENST00000427740 390 ntBASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms