Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
ANKRD55Q3KP44 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
ANKRD55Q3KP44 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC4.44□□□□□ -1.7
ANKRD55Q3KP44 AC092121.1-201ENST00000569452 202 ntBASIC4.44□□□□□ -1.7
ANKRD55Q3KP44 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.44□□□□□ -1.7
ANKRD55Q3KP44 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.44□□□□□ -1.7
ANKRD55Q3KP44 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.44□□□□□ -1.7
ANKRD55Q3KP44 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.44□□□□□ -1.7
ANKRD55Q3KP44 AC040174.2-201ENST00000602701 465 ntBASIC4.44□□□□□ -1.7
ANKRD55Q3KP44 AC108865.2-201ENST00000606881 432 ntBASIC4.44□□□□□ -1.7
ANKRD55Q3KP44 AC012557.1-201ENST00000607115 611 ntBASIC4.44□□□□□ -1.7
ANKRD55Q3KP44 AC090948.2-201ENST00000607363 564 ntBASIC4.44□□□□□ -1.7
ANKRD55Q3KP44 AP003400.3-201ENST00000624904 346 ntBASIC4.44□□□□□ -1.7
ANKRD55Q3KP44 AC006453.5-201ENST00000636451 619 ntBASIC4.44□□□□□ -1.7
ANKRD55Q3KP44 MAPK10-304ENST00000641341 3984 ntBASIC4.44□□□□□ -1.7
ANKRD55Q3KP44 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
ANKRD55Q3KP44 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
ANKRD55Q3KP44 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.44□□□□□ -1.7
ANKRD55Q3KP44 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
ANKRD55Q3KP44 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
ANKRD55Q3KP44 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
ANKRD55Q3KP44 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 AC021242.1-201ENST00000507315 2035 ntBASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 AL731566.1-201ENST00000620490 1937 ntBASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 RNA5SP477-201ENST00000362639 119 ntBASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 RNU6-40P-201ENST00000384254 107 ntBASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 ATP5HP3-201ENST00000396994 486 ntBASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 OR2AT2P-201ENST00000413438 905 ntBASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 AC092570.3-201ENST00000420113 693 ntBASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 AC066692.1-201ENST00000421721 457 ntBASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 RPL12P34-201ENST00000424532 479 ntBASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 AC009965.2-201ENST00000425328 970 ntBASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 AC079807.1-201ENST00000429993 481 ntBASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 RPL34P6-201ENST00000432390 345 ntBASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 MTND2P21-201ENST00000436242 1042 ntBASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 MTND4P15-201ENST00000437913 1033 ntBASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 AL445665.1-202ENST00000452436 324 ntBASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 HMGB1P26-201ENST00000452520 628 ntBASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 AC005229.2-201ENST00000456995 399 ntBASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 RPS3AP15-201ENST00000483874 781 ntBASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 RN7SL814P-201ENST00000487715 300 ntBASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 RNU6-1004P-201ENST00000516584 111 ntBASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 OR8K2P-201ENST00000524645 927 ntBASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 AC021483.2-201ENST00000567415 758 ntBASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 AC090312.1-201ENST00000580637 348 ntBASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 AC007423.1-201ENST00000605009 627 ntBASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 AL355802.4-201ENST00000607635 548 ntBASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 AC037198.3-201ENST00000616754 526 ntBASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 AL356490.1-201ENST00000623079 479 ntBASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 AP000648.2-201ENST00000624182 404 ntBASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 AL356094.1-201ENST00000624663 1212 ntBASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 AC129915.3-201ENST00000634128 948 ntBASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 OR8G3P-202ENST00000641572 1255 ntBASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 DDX18P4-201ENST00000511690 1966 ntBASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ANKRD55Q3KP44 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.42□□□□□ -1.7
ANKRD55Q3KP44 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
ANKRD55Q3KP44 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ANKRD55Q3KP44 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.42□□□□□ -1.7
ANKRD55Q3KP44 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
ANKRD55Q3KP44 AP001642.1-201ENST00000624727 2117 ntBASIC4.42□□□□□ -1.7
ANKRD55Q3KP44 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
ANKRD55Q3KP44 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
ANKRD55Q3KP44 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.42□□□□□ -1.7
ANKRD55Q3KP44 RNA5SP510-201ENST00000364697 99 ntBASIC4.42□□□□□ -1.7
ANKRD55Q3KP44 FIG4-202ENST00000368941 791 ntTSL 3 BASIC4.42□□□□□ -1.7
ANKRD55Q3KP44 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ANKRD55Q3KP44 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
ANKRD55Q3KP44 MIR1203-201ENST00000408812 85 ntBASIC4.42□□□□□ -1.7
ANKRD55Q3KP44 GSTM3P2-201ENST00000412746 530 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms