Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 RPS16P5-201ENST00000406501 404 ntBASIC5.72□□□□□ -1.49
GABPAQ06546 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.72□□□□□ -1.49
GABPAQ06546 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GABPAQ06546 AC119751.6-201ENST00000416712 186 ntBASIC5.72□□□□□ -1.49
GABPAQ06546 LINC00993-201ENST00000420453 540 ntBASIC5.72□□□□□ -1.49
GABPAQ06546 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
GABPAQ06546 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.72□□□□□ -1.49
GABPAQ06546 AC009220.1-201ENST00000451614 275 ntBASIC5.72□□□□□ -1.49
GABPAQ06546 AC108751.3-201ENST00000461814 1020 ntBASIC5.72□□□□□ -1.49
GABPAQ06546 RN7SL860P-201ENST00000473738 223 ntBASIC5.72□□□□□ -1.49
GABPAQ06546 RN7SL459P-201ENST00000481078 302 ntBASIC5.72□□□□□ -1.49
GABPAQ06546 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.72□□□□□ -1.49
GABPAQ06546 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.72□□□□□ -1.49
GABPAQ06546 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GABPAQ06546 OR5M2P-201ENST00000529003 936 ntBASIC5.72□□□□□ -1.49
GABPAQ06546 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.72□□□□□ -1.49
GABPAQ06546 MIR5699-201ENST00000578903 90 ntBASIC5.72□□□□□ -1.49
GABPAQ06546 AC209154.1-201ENST00000582156 337 ntBASIC5.72□□□□□ -1.49
GABPAQ06546 FAM27B-201ENST00000610601 213 ntBASIC5.72□□□□□ -1.49
GABPAQ06546 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
GABPAQ06546 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
GABPAQ06546 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
GABPAQ06546 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.72□□□□□ -1.49
GABPAQ06546 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GABPAQ06546 SCARNA15-201ENST00000607520 4325 ntBASIC5.72□□□□□ -1.49
GABPAQ06546 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
GABPAQ06546 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.72□□□□□ -1.49
GABPAQ06546 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GABPAQ06546 AC083837.1-201ENST00000565297 2994 ntBASIC5.72□□□□□ -1.49
GABPAQ06546 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
GABPAQ06546 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
GABPAQ06546 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
GABPAQ06546 AC011447.7-201ENST00000624228 1590 ntBASIC5.72□□□□□ -1.49
GABPAQ06546 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.71□□□□□ -1.49
GABPAQ06546 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.49
GABPAQ06546 AL450345.1-202ENST00000605741 3881 ntBASIC5.71□□□□□ -1.5
GABPAQ06546 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
GABPAQ06546 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GABPAQ06546 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GABPAQ06546 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
GABPAQ06546 AL691447.1-201ENST00000419456 387 ntBASIC5.71□□□□□ -1.5
GABPAQ06546 NIPA2P1-201ENST00000426223 976 ntBASIC5.71□□□□□ -1.5
GABPAQ06546 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GABPAQ06546 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.71□□□□□ -1.5
GABPAQ06546 RPL12P20-201ENST00000475538 479 ntBASIC5.71□□□□□ -1.5
GABPAQ06546 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.71□□□□□ -1.5
GABPAQ06546 RPL5P22-201ENST00000480199 884 ntBASIC5.71□□□□□ -1.5
GABPAQ06546 RN7SL346P-201ENST00000491561 294 ntBASIC5.71□□□□□ -1.5
GABPAQ06546 RPL23AP72-201ENST00000492447 435 ntBASIC5.71□□□□□ -1.5
GABPAQ06546 AC073073.1-201ENST00000493920 463 ntBASIC5.71□□□□□ -1.5
GABPAQ06546 AC104971.1-201ENST00000495117 578 ntBASIC5.71□□□□□ -1.5
GABPAQ06546 OR51K1P-201ENST00000510214 950 ntBASIC5.71□□□□□ -1.5
GABPAQ06546 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
GABPAQ06546 GSTP1P1-201ENST00000548078 319 ntBASIC5.71□□□□□ -1.5
GABPAQ06546 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.71□□□□□ -1.5
GABPAQ06546 HMGN2P47-201ENST00000559378 272 ntBASIC5.71□□□□□ -1.5
GABPAQ06546 AC105129.1-201ENST00000560250 297 ntBASIC5.71□□□□□ -1.5
GABPAQ06546 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.71□□□□□ -1.5
GABPAQ06546 AL121932.1-201ENST00000605542 214 ntBASIC5.71□□□□□ -1.5
GABPAQ06546 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.71□□□□□ -1.5
GABPAQ06546 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.71□□□□□ -1.5
GABPAQ06546 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
GABPAQ06546 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
GABPAQ06546 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
GABPAQ06546 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
GABPAQ06546 AC233968.1-201ENST00000611212 1300 ntBASIC5.71□□□□□ -1.5
GABPAQ06546 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.71□□□□□ -1.5
GABPAQ06546 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GABPAQ06546 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GABPAQ06546 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
GABPAQ06546 OR9K1P-202ENST00000641111 3217 ntBASIC5.7□□□□□ -1.5
GABPAQ06546 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.7□□□□□ -1.5
GABPAQ06546 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
GABPAQ06546 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
GABPAQ06546 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
GABPAQ06546 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
GABPAQ06546 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.7□□□□□ -1.5
GABPAQ06546 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
GABPAQ06546 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.7□□□□□ -1.5
GABPAQ06546 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.7□□□□□ -1.5
GABPAQ06546 RNU1-32P-201ENST00000363937 159 ntBASIC5.7□□□□□ -1.5
GABPAQ06546 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.7□□□□□ -1.5
GABPAQ06546 SNORA70F-201ENST00000384142 135 ntBASIC5.7□□□□□ -1.5
GABPAQ06546 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.7□□□□□ -1.5
GABPAQ06546 AC013268.2-201ENST00000420753 337 ntBASIC5.7□□□□□ -1.5
GABPAQ06546 HMGB1P32-201ENST00000425971 565 ntBASIC5.7□□□□□ -1.5
GABPAQ06546 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.7□□□□□ -1.5
GABPAQ06546 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.7□□□□□ -1.5
GABPAQ06546 AC006463.2-201ENST00000473326 348 ntBASIC5.7□□□□□ -1.5
GABPAQ06546 RN7SL558P-201ENST00000497468 299 ntBASIC5.7□□□□□ -1.5
GABPAQ06546 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.7□□□□□ -1.5
GABPAQ06546 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.7□□□□□ -1.5
GABPAQ06546 ENPP7P9-201ENST00000514456 627 ntBASIC5.7□□□□□ -1.5
GABPAQ06546 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.7□□□□□ -1.5
GABPAQ06546 RPL23AP53-201ENST00000521854 457 ntBASIC5.7□□□□□ -1.5
GABPAQ06546 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
GABPAQ06546 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
GABPAQ06546 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
GABPAQ06546 AL110118.1-201ENST00000553543 400 ntBASIC5.7□□□□□ -1.5
GABPAQ06546 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms