Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.38□□□□□ -1.39
RHBDL3P58872 AC023421.1-201ENST00000590535 1785 ntBASIC6.38□□□□□ -1.39
RHBDL3P58872 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
RHBDL3P58872 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RHBDL3P58872 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.38□□□□□ -1.39
RHBDL3P58872 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RHBDL3P58872 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RHBDL3P58872 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.38□□□□□ -1.39
RHBDL3P58872 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RHBDL3P58872 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.37□□□□□ -1.39
RHBDL3P58872 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.37□□□□□ -1.39
RHBDL3P58872 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
RHBDL3P58872 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RHBDL3P58872 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
RHBDL3P58872 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.37□□□□□ -1.39
RHBDL3P58872 AC005332.5-201ENST00000591222 2919 ntBASIC6.37□□□□□ -1.39
RHBDL3P58872 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
RHBDL3P58872 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
RHBDL3P58872 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RHBDL3P58872 PANDAR-201ENST00000629595 1506 ntBASIC6.37□□□□□ -1.39
RHBDL3P58872 GTF2H2B-203ENST00000508065 1432 ntBASIC6.37□□□□□ -1.39
RHBDL3P58872 AC092451.3-201ENST00000625067 1343 ntBASIC6.37□□□□□ -1.39
RHBDL3P58872 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
RHBDL3P58872 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
RHBDL3P58872 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.37□□□□□ -1.39
RHBDL3P58872 AC010385.1-201ENST00000412374 256 ntBASIC6.37□□□□□ -1.39
RHBDL3P58872 LINC01347-201ENST00000417964 355 ntBASIC6.37□□□□□ -1.39
RHBDL3P58872 PNRC2P1-201ENST00000423940 420 ntBASIC6.37□□□□□ -1.39
RHBDL3P58872 AC012497.1-201ENST00000429392 575 ntBASIC6.37□□□□□ -1.39
RHBDL3P58872 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC6.37□□□□□ -1.39
RHBDL3P58872 RPS11P7-201ENST00000442125 465 ntBASIC6.37□□□□□ -1.39
RHBDL3P58872 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC6.37□□□□□ -1.39
RHBDL3P58872 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC6.37□□□□□ -1.39
RHBDL3P58872 RPL7P55-201ENST00000450522 746 ntBASIC6.37□□□□□ -1.39
RHBDL3P58872 AC009127.1-201ENST00000467090 155 ntBASIC6.37□□□□□ -1.39
RHBDL3P58872 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RHBDL3P58872 SETP6-201ENST00000479329 568 ntBASIC6.37□□□□□ -1.39
RHBDL3P58872 AC104687.1-201ENST00000485829 412 ntBASIC6.37□□□□□ -1.39
RHBDL3P58872 AC109462.1-201ENST00000491087 368 ntBASIC6.37□□□□□ -1.39
RHBDL3P58872 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC6.37□□□□□ -1.39
RHBDL3P58872 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC6.37□□□□□ -1.39
RHBDL3P58872 AC024940.3-201ENST00000538551 316 ntBASIC6.37□□□□□ -1.39
RHBDL3P58872 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
RHBDL3P58872 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC6.37□□□□□ -1.39
RHBDL3P58872 NPM1P47-201ENST00000560843 856 ntBASIC6.37□□□□□ -1.39
RHBDL3P58872 OR1F2P-201ENST00000570470 933 ntBASIC6.37□□□□□ -1.39
RHBDL3P58872 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC6.37□□□□□ -1.39
RHBDL3P58872 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.37□□□□□ -1.39
RHBDL3P58872 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.37□□□□□ -1.39
RHBDL3P58872 AP001267.4-201ENST00000602598 545 ntBASIC6.37□□□□□ -1.39
RHBDL3P58872 AC011374.2-201ENST00000607135 526 ntBASIC6.37□□□□□ -1.39
RHBDL3P58872 AC009163.6-201ENST00000612367 342 ntBASIC6.37□□□□□ -1.39
RHBDL3P58872 MIR7973-1-201ENST00000614683 76 ntBASIC6.37□□□□□ -1.39
RHBDL3P58872 AC139769.3-201ENST00000618383 175 ntBASIC6.37□□□□□ -1.39
RHBDL3P58872 AL109620.1-201ENST00000618738 1197 ntBASIC6.37□□□□□ -1.39
RHBDL3P58872 AP002799.1-201ENST00000623552 423 ntBASIC6.37□□□□□ -1.39
RHBDL3P58872 AC083865.1-201ENST00000636634 831 ntBASIC6.37□□□□□ -1.39
RHBDL3P58872 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
RHBDL3P58872 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.37□□□□□ -1.39
RHBDL3P58872 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.37□□□□□ -1.39
RHBDL3P58872 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RHBDL3P58872 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RHBDL3P58872 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
RHBDL3P58872 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
RHBDL3P58872 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
RHBDL3P58872 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
RHBDL3P58872 MAPK10-338ENST00000641647 3362 ntBASIC6.37□□□□□ -1.39
RHBDL3P58872 HSPA8P18-201ENST00000439846 1928 ntBASIC6.37□□□□□ -1.39
RHBDL3P58872 AC114774.1-201ENST00000507410 1770 ntBASIC6.36□□□□□ -1.39
RHBDL3P58872 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
RHBDL3P58872 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RHBDL3P58872 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RHBDL3P58872 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RHBDL3P58872 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RHBDL3P58872 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC6.36□□□□□ -1.39
RHBDL3P58872 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RHBDL3P58872 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RHBDL3P58872 MIR550A3-201ENST00000390735 95 ntBASIC6.36□□□□□ -1.39
RHBDL3P58872 AL589647.1-201ENST00000402485 466 ntBASIC6.36□□□□□ -1.39
RHBDL3P58872 AC233289.1-201ENST00000403700 508 ntBASIC6.36□□□□□ -1.39
RHBDL3P58872 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.36□□□□□ -1.39
RHBDL3P58872 MTCO3P4-201ENST00000419236 787 ntBASIC6.36□□□□□ -1.39
RHBDL3P58872 VN1R42P-201ENST00000424651 344 ntBASIC6.36□□□□□ -1.39
RHBDL3P58872 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC6.36□□□□□ -1.39
RHBDL3P58872 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC6.36□□□□□ -1.39
RHBDL3P58872 VN1R54P-201ENST00000435210 1049 ntBASIC6.36□□□□□ -1.39
RHBDL3P58872 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.36□□□□□ -1.39
RHBDL3P58872 H3F3BP1-201ENST00000440551 403 ntBASIC6.36□□□□□ -1.39
RHBDL3P58872 CEACAMP7-201ENST00000444105 496 ntBASIC6.36□□□□□ -1.39
RHBDL3P58872 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RHBDL3P58872 AC092647.2-201ENST00000452998 253 ntBASIC6.36□□□□□ -1.39
RHBDL3P58872 METTL15P1-201ENST00000481421 1045 ntBASIC6.36□□□□□ -1.39
RHBDL3P58872 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC6.36□□□□□ -1.39
RHBDL3P58872 RN7SL423P-201ENST00000486202 304 ntBASIC6.36□□□□□ -1.39
RHBDL3P58872 RN7SL97P-201ENST00000486780 299 ntBASIC6.36□□□□□ -1.39
RHBDL3P58872 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RHBDL3P58872 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RHBDL3P58872 SCARNA20.4-201ENST00000516969 131 ntBASIC6.36□□□□□ -1.39
RHBDL3P58872 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.36□□□□□ -1.39
RHBDL3P58872 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms