Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.05□□□□□ -1.6
CDH12P55289 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.05□□□□□ -1.6
CDH12P55289 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CDH12P55289 AP000769.2-201ENST00000602344 396 ntBASIC5.05□□□□□ -1.6
CDH12P55289 AL138895.2-201ENST00000603019 178 ntBASIC5.05□□□□□ -1.6
CDH12P55289 AC093673.2-201ENST00000609674 331 ntBASIC5.05□□□□□ -1.6
CDH12P55289 AP005431.1-201ENST00000618479 319 ntBASIC5.05□□□□□ -1.6
CDH12P55289 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.05□□□□□ -1.6
CDH12P55289 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CDH12P55289 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CDH12P55289 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
CDH12P55289 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.05□□□□□ -1.6
CDH12P55289 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDH12P55289 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.05□□□□□ -1.6
CDH12P55289 ADAM5-202ENST00000399789 1942 ntBASIC5.05□□□□□ -1.6
CDH12P55289 AC245100.2-201ENST00000454544 1679 ntBASIC5.05□□□□□ -1.6
CDH12P55289 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CDH12P55289 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.05□□□□□ -1.6
CDH12P55289 AC007342.7-201ENST00000624610 2337 ntBASIC5.05□□□□□ -1.6
CDH12P55289 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CDH12P55289 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH12P55289 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CDH12P55289 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CDH12P55289 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH12P55289 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDH12P55289 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDH12P55289 OR52B3P-201ENST00000314715 928 ntBASIC5.04□□□□□ -1.6
CDH12P55289 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDH12P55289 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDH12P55289 AF228730.1-201ENST00000397972 663 ntBASIC5.04□□□□□ -1.6
CDH12P55289 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.04□□□□□ -1.6
CDH12P55289 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.04□□□□□ -1.6
CDH12P55289 AC010385.1-201ENST00000412374 256 ntBASIC5.04□□□□□ -1.6
CDH12P55289 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.04□□□□□ -1.6
CDH12P55289 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.04□□□□□ -1.6
CDH12P55289 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.04□□□□□ -1.6
CDH12P55289 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH12P55289 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.04□□□□□ -1.6
CDH12P55289 ELOCP11-201ENST00000436690 332 ntBASIC5.04□□□□□ -1.6
CDH12P55289 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.04□□□□□ -1.6
CDH12P55289 DNAJA1P5-201ENST00000440278 943 ntBASIC5.04□□□□□ -1.6
CDH12P55289 ELOCP16-201ENST00000444494 332 ntBASIC5.04□□□□□ -1.6
CDH12P55289 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.04□□□□□ -1.6
CDH12P55289 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.04□□□□□ -1.6
CDH12P55289 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.04□□□□□ -1.6
CDH12P55289 TPT1P1-201ENST00000458495 518 ntBASIC5.04□□□□□ -1.6
CDH12P55289 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH12P55289 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.04□□□□□ -1.6
CDH12P55289 AC005412.2-201ENST00000492004 341 ntBASIC5.04□□□□□ -1.6
CDH12P55289 RN7SL649P-201ENST00000496974 275 ntBASIC5.04□□□□□ -1.6
CDH12P55289 AC105233.1-201ENST00000498840 781 ntBASIC5.04□□□□□ -1.6
CDH12P55289 AC025459.1-201ENST00000504072 156 ntBASIC5.04□□□□□ -1.6
CDH12P55289 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC5.04□□□□□ -1.6
CDH12P55289 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.04□□□□□ -1.6
CDH12P55289 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.04□□□□□ -1.6
CDH12P55289 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.04□□□□□ -1.6
CDH12P55289 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.04□□□□□ -1.6
CDH12P55289 TOMM20P1-201ENST00000534518 427 ntBASIC5.04□□□□□ -1.6
CDH12P55289 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.04□□□□□ -1.6
CDH12P55289 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.04□□□□□ -1.6
CDH12P55289 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.04□□□□□ -1.6
CDH12P55289 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.04□□□□□ -1.6
CDH12P55289 PRPF19P1-201ENST00000584766 898 ntBASIC5.04□□□□□ -1.6
CDH12P55289 AC012254.4-201ENST00000588843 273 ntBASIC5.04□□□□□ -1.6
CDH12P55289 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.04□□□□□ -1.6
CDH12P55289 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.04□□□□□ -1.6
CDH12P55289 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.04□□□□□ -1.6
CDH12P55289 AC019131.2-201ENST00000609071 870 ntBASIC5.04□□□□□ -1.6
CDH12P55289 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.04□□□□□ -1.6
CDH12P55289 MIR6071-201ENST00000616741 78 ntBASIC5.04□□□□□ -1.6
CDH12P55289 AC009159.2-201ENST00000617603 606 ntBASIC5.04□□□□□ -1.6
CDH12P55289 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH12P55289 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH12P55289 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH12P55289 AC083865.1-201ENST00000636634 831 ntBASIC5.04□□□□□ -1.6
CDH12P55289 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDH12P55289 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CDH12P55289 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDH12P55289 AC106872.5-201ENST00000508856 1416 ntBASIC5.04□□□□□ -1.6
CDH12P55289 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDH12P55289 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDH12P55289 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH12P55289 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.03□□□□□ -1.6
CDH12P55289 AC116158.1-201ENST00000560231 2129 ntBASIC5.03□□□□□ -1.6
CDH12P55289 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDH12P55289 HSPD1P11-201ENST00000508643 1702 ntBASIC5.03□□□□□ -1.6
CDH12P55289 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDH12P55289 AC073136.1-201ENST00000449426 2884 ntBASIC5.03□□□□□ -1.6
CDH12P55289 AC011503.2-201ENST00000594230 1500 ntBASIC5.03□□□□□ -1.6
CDH12P55289 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH12P55289 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH12P55289 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CDH12P55289 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.03□□□□□ -1.6
CDH12P55289 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CDH12P55289 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDH12P55289 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.03□□□□□ -1.6
CDH12P55289 MT-TP-201ENST00000387461 68 ntBASIC5.03□□□□□ -1.6
CDH12P55289 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.03□□□□□ -1.6
CDH12P55289 PCNPP4-201ENST00000414817 517 ntBASIC5.03□□□□□ -1.6
CDH12P55289 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms