Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC026782.2-201ENST00000510845 636 ntBASIC5.07□□□□□ -1.6
PDX1P52945 HMGB1P47-201ENST00000511281 589 ntBASIC5.07□□□□□ -1.6
PDX1P52945 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.07□□□□□ -1.6
PDX1P52945 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.07□□□□□ -1.6
PDX1P52945 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.07□□□□□ -1.6
PDX1P52945 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.07□□□□□ -1.6
PDX1P52945 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.07□□□□□ -1.6
PDX1P52945 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.07□□□□□ -1.6
PDX1P52945 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
PDX1P52945 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.07□□□□□ -1.6
PDX1P52945 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
PDX1P52945 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.07□□□□□ -1.6
PDX1P52945 AL136520.1-202ENST00000555494 763 ntBASIC5.07□□□□□ -1.6
PDX1P52945 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PDX1P52945 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PDX1P52945 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.07□□□□□ -1.6
PDX1P52945 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.07□□□□□ -1.6
PDX1P52945 MIR4433B-201ENST00000581329 102 ntBASIC5.07□□□□□ -1.6
PDX1P52945 MIR7853-201ENST00000584820 132 ntBASIC5.07□□□□□ -1.6
PDX1P52945 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.07□□□□□ -1.6
PDX1P52945 AC108738.1-201ENST00000603703 237 ntBASIC5.07□□□□□ -1.6
PDX1P52945 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.07□□□□□ -1.6
PDX1P52945 AL627230.1-201ENST00000613077 211 ntBASIC5.07□□□□□ -1.6
PDX1P52945 AL591926.8-201ENST00000616876 211 ntBASIC5.07□□□□□ -1.6
PDX1P52945 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PDX1P52945 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
PDX1P52945 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.07□□□□□ -1.6
PDX1P52945 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PDX1P52945 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PDX1P52945 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.07□□□□□ -1.6
PDX1P52945 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PDX1P52945 AC092747.4-201ENST00000620519 1861 ntBASIC5.07□□□□□ -1.6
PDX1P52945 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PDX1P52945 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PDX1P52945 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.06□□□□□ -1.6
PDX1P52945 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.06□□□□□ -1.6
PDX1P52945 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.06□□□□□ -1.6
PDX1P52945 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.06□□□□□ -1.6
PDX1P52945 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.06□□□□□ -1.6
PDX1P52945 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDX1P52945 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDX1P52945 AP001284.1-201ENST00000528393 2118 ntBASIC5.06□□□□□ -1.6
PDX1P52945 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
PDX1P52945 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.06□□□□□ -1.6
PDX1P52945 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PDX1P52945 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.06□□□□□ -1.6
PDX1P52945 AP001029.2-203ENST00000589795 4910 ntBASIC5.06□□□□□ -1.6
PDX1P52945 THAP12P4-201ENST00000528321 2266 ntBASIC5.06□□□□□ -1.6
PDX1P52945 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PDX1P52945 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDX1P52945 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDX1P52945 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDX1P52945 RNA5SP87-201ENST00000384155 118 ntBASIC5.06□□□□□ -1.6
PDX1P52945 AL078599.1-201ENST00000402075 293 ntBASIC5.06□□□□□ -1.6
PDX1P52945 NUDT19P3-201ENST00000404698 555 ntBASIC5.06□□□□□ -1.6
PDX1P52945 AC007563.3-201ENST00000433233 371 ntBASIC5.06□□□□□ -1.6
PDX1P52945 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.06□□□□□ -1.6
PDX1P52945 XKRY2-201ENST00000442362 1093 ntBASIC5.06□□□□□ -1.6
PDX1P52945 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PDX1P52945 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.06□□□□□ -1.6
PDX1P52945 snoU13.20-201ENST00000459180 104 ntBASIC5.06□□□□□ -1.6
PDX1P52945 AC097484.1-201ENST00000471148 389 ntBASIC5.06□□□□□ -1.6
PDX1P52945 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC5.06□□□□□ -1.6
PDX1P52945 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.06□□□□□ -1.6
PDX1P52945 AC008628.1-201ENST00000508663 265 ntBASIC5.06□□□□□ -1.6
PDX1P52945 GTF2F2P1-201ENST00000511083 675 ntBASIC5.06□□□□□ -1.6
PDX1P52945 SCARNA20.4-201ENST00000516969 131 ntBASIC5.06□□□□□ -1.6
PDX1P52945 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.06□□□□□ -1.6
PDX1P52945 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.06□□□□□ -1.6
PDX1P52945 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
PDX1P52945 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDX1P52945 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDX1P52945 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.06□□□□□ -1.6
PDX1P52945 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.06□□□□□ -1.6
PDX1P52945 PCNPP1-201ENST00000552501 511 ntBASIC5.06□□□□□ -1.6
PDX1P52945 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.06□□□□□ -1.6
PDX1P52945 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC5.06□□□□□ -1.6
PDX1P52945 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.06□□□□□ -1.6
PDX1P52945 AC009597.2-201ENST00000604659 592 ntBASIC5.06□□□□□ -1.6
PDX1P52945 AC135803.1-201ENST00000608748 565 ntBASIC5.06□□□□□ -1.6
PDX1P52945 CR589904.2-201ENST00000612533 440 ntBASIC5.06□□□□□ -1.6
PDX1P52945 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDX1P52945 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDX1P52945 uc_338.7-201ENST00000621834 124 ntBASIC5.06□□□□□ -1.6
PDX1P52945 AP006248.3-201ENST00000623580 594 ntBASIC5.06□□□□□ -1.6
PDX1P52945 AC112694.2-201ENST00000623697 768 ntBASIC5.06□□□□□ -1.6
PDX1P52945 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.06□□□□□ -1.6
PDX1P52945 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PDX1P52945 AP001002.1-201ENST00000625148 1513 ntBASIC5.06□□□□□ -1.6
PDX1P52945 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PDX1P52945 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PDX1P52945 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PDX1P52945 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDX1P52945 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.06□□□□□ -1.6
PDX1P52945 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
PDX1P52945 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDX1P52945 AL512283.1-201ENST00000606756 1384 ntBASIC5.05□□□□□ -1.6
PDX1P52945 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDX1P52945 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.05□□□□□ -1.6
PDX1P52945 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms