Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.43□□□□□ -1.7
CX3CR1P49238 NPM1P4-201ENST00000414095 812 ntBASIC4.43□□□□□ -1.7
CX3CR1P49238 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CX3CR1P49238 ARAFP1-201ENST00000422172 605 ntBASIC4.43□□□□□ -1.7
CX3CR1P49238 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.43□□□□□ -1.7
CX3CR1P49238 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.43□□□□□ -1.7
CX3CR1P49238 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.43□□□□□ -1.7
CX3CR1P49238 RPL7AP61-201ENST00000443410 636 ntBASIC4.43□□□□□ -1.7
CX3CR1P49238 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.43□□□□□ -1.7
CX3CR1P49238 AC009127.1-201ENST00000467090 155 ntBASIC4.43□□□□□ -1.7
CX3CR1P49238 RN7SL174P-201ENST00000475578 289 ntBASIC4.43□□□□□ -1.7
CX3CR1P49238 PGAM1P13-201ENST00000507497 754 ntBASIC4.43□□□□□ -1.7
CX3CR1P49238 OR10D4P-201ENST00000525892 951 ntBASIC4.43□□□□□ -1.7
CX3CR1P49238 AC005000.1-201ENST00000536192 288 ntBASIC4.43□□□□□ -1.7
CX3CR1P49238 AGGF1P9-201ENST00000561884 913 ntBASIC4.43□□□□□ -1.7
CX3CR1P49238 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.43□□□□□ -1.7
CX3CR1P49238 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.43□□□□□ -1.7
CX3CR1P49238 AL356274.1-201ENST00000617064 410 ntBASIC4.43□□□□□ -1.7
CX3CR1P49238 AP002505.2-201ENST00000623585 696 ntBASIC4.43□□□□□ -1.7
CX3CR1P49238 AC021106.3-201ENST00000623925 531 ntBASIC4.43□□□□□ -1.7
CX3CR1P49238 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.43□□□□□ -1.7
CX3CR1P49238 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.43□□□□□ -1.7
CX3CR1P49238 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CX3CR1P49238 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.43□□□□□ -1.7
CX3CR1P49238 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CX3CR1P49238 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.43□□□□□ -1.7
CX3CR1P49238 SCN1A-220ENST00000641603 12506 ntBASIC4.43□□□□□ -1.7
CX3CR1P49238 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CX3CR1P49238 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.43□□□□□ -1.7
CX3CR1P49238 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CX3CR1P49238 LINC01355-201ENST00000566551 5444 ntBASIC4.43□□□□□ -1.7
CX3CR1P49238 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.42□□□□□ -1.7
CX3CR1P49238 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CX3CR1P49238 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.42□□□□□ -1.7
CX3CR1P49238 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CX3CR1P49238 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.42□□□□□ -1.7
CX3CR1P49238 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CX3CR1P49238 SNORA17.1-201ENST00000362945 126 ntBASIC4.42□□□□□ -1.7
CX3CR1P49238 RN7SKP160-201ENST00000363804 340 ntBASIC4.42□□□□□ -1.7
CX3CR1P49238 RNU1-43P-201ENST00000365052 165 ntBASIC4.42□□□□□ -1.7
CX3CR1P49238 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CX3CR1P49238 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.42□□□□□ -1.7
CX3CR1P49238 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CX3CR1P49238 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.42□□□□□ -1.7
CX3CR1P49238 Z68694.1-201ENST00000413929 841 ntBASIC4.42□□□□□ -1.7
CX3CR1P49238 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.42□□□□□ -1.7
CX3CR1P49238 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.42□□□□□ -1.7
CX3CR1P49238 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.42□□□□□ -1.7
CX3CR1P49238 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.42□□□□□ -1.7
CX3CR1P49238 NPM1P33-201ENST00000438918 872 ntBASIC4.42□□□□□ -1.7
CX3CR1P49238 TXNP5-201ENST00000441043 315 ntBASIC4.42□□□□□ -1.7
CX3CR1P49238 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.42□□□□□ -1.7
CX3CR1P49238 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.42□□□□□ -1.7
CX3CR1P49238 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.42□□□□□ -1.7
CX3CR1P49238 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.42□□□□□ -1.7
CX3CR1P49238 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.42□□□□□ -1.7
CX3CR1P49238 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.42□□□□□ -1.7
CX3CR1P49238 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CX3CR1P49238 AL671862.1-201ENST00000515851 349 ntBASIC4.42□□□□□ -1.7
CX3CR1P49238 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.42□□□□□ -1.7
CX3CR1P49238 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.42□□□□□ -1.7
CX3CR1P49238 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CX3CR1P49238 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC4.42□□□□□ -1.7
CX3CR1P49238 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.42□□□□□ -1.7
CX3CR1P49238 AC023813.4-201ENST00000607580 580 ntBASIC4.42□□□□□ -1.7
CX3CR1P49238 AL139407.1-201ENST00000613826 1175 ntBASIC4.42□□□□□ -1.7
CX3CR1P49238 AC105105.5-201ENST00000622635 1294 ntBASIC4.42□□□□□ -1.7
CX3CR1P49238 AP003499.2-201ENST00000624100 483 ntBASIC4.42□□□□□ -1.7
CX3CR1P49238 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.42□□□□□ -1.7
CX3CR1P49238 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CX3CR1P49238 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.42□□□□□ -1.7
CX3CR1P49238 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CX3CR1P49238 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CX3CR1P49238 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.42□□□□□ -1.7
CX3CR1P49238 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CX3CR1P49238 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CX3CR1P49238 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CX3CR1P49238 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.41□□□□□ -1.7
CX3CR1P49238 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CX3CR1P49238 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CX3CR1P49238 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CX3CR1P49238 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CX3CR1P49238 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.41□□□□□ -1.7
CX3CR1P49238 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.41□□□□□ -1.7
CX3CR1P49238 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CX3CR1P49238 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CX3CR1P49238 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.41□□□□□ -1.7
CX3CR1P49238 AC010132.2-201ENST00000295493 1043 ntBASIC4.41□□□□□ -1.7
CX3CR1P49238 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CX3CR1P49238 MIR365B-201ENST00000362317 111 ntBASIC4.41□□□□□ -1.7
CX3CR1P49238 U3.2-201ENST00000362981 210 ntBASIC4.41□□□□□ -1.7
CX3CR1P49238 RNU4-7P-201ENST00000364758 141 ntBASIC4.41□□□□□ -1.7
CX3CR1P49238 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CX3CR1P49238 U3.25-201ENST00000391209 220 ntBASIC4.41□□□□□ -1.7
CX3CR1P49238 RN7SKP114-201ENST00000410327 279 ntBASIC4.41□□□□□ -1.7
CX3CR1P49238 SLC35E1P1-201ENST00000419313 864 ntBASIC4.41□□□□□ -1.7
CX3CR1P49238 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.41□□□□□ -1.7
CX3CR1P49238 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.41□□□□□ -1.7
CX3CR1P49238 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.41□□□□□ -1.7
CX3CR1P49238 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms